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Department of Biology and BiochemistryUniversity of Houston  


- Non-interactive : traverse the representative prokaryotic 16S rRNA phylogenetic tree [ fullprogressive ]

- Interactive : query the database.









RNA World

Informatics

Phylogeny

Database


PROKARYOTIC 16S rRNA SIGNATURE DATABASE
July/2/2002 


Overview

- This site is functional but currently under active construction.

- The RDP Release 7.1 was the version of the data files which were used to identify the bacterial 16S rRNA signatures.

- The database currently has signature sequences of undecamers. A total of 228,905 sequences are in the database.

- When tranverse the phylogenetic tree, maximum the browser window size for the best viewing. Searching the database could be slow due to the large size of the database.


Contributors

- The underlying system implementation and computational work was performed by Zhengdong Zhang.

- This database web site was designed and made by Z. Zhang. Now maintained by Dianhui Zhu.

- This work was supervised by Dr. George E. Fox.


Contact

- Please send comments or suggestions to Z. Zhang at zzhang@bayou.uh.edu.

- For any other correspondence, please contact Dr. G. E. Fox at fox@uh.edu.


  Revised on August 28, 2001. Powered by Linux, Perl and Mysql. Copyright © 2001 Fox Lab. All rights reserved.