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Department of Biology and BiochemistryUniversity of Houston  


- Non-interactive : all records sorted by base pair type | authors' names.

- Interactive : search the database.

- Summary table [Single page | Multiple pages].

- Structures of Base Pairs, Base Triples and Base Quadruples.

- "Database of non-canonical base pairs found in known RNA structures" [PDF format. Nucleic Acid Research, 2000 Jan 1; 28(1):375-376].




RNA World

Informatics

Phylogeny

Database


NON-CANONICAL BASE PAIR DATABASE : All Records Page Sorted by Authors' Name


# Base Pair TypeAuthorsDetails
 
1  more info...
2  GU wobbleAddess KJ, Basilion JP, Klausner RD, Rouault TA, Pardi Amore info...
3  GU wobbleAddess KJ, Basilion JP, Klausner RD, Rouault TA, Pardi Amore info...
4  AA N1-amino, symmetricAgalarov SC, Sridhar Prasad G, Funke PM, Stout CD, Williamson JRmore info...
5  AU reverse HoogsteenAgalarov SC, Sridhar Prasad G, Funke PM, Stout CD, Williamson JRmore info...
6  GA iminoAgalarov SC, Sridhar Prasad G, Funke PM, Stout CD, Williamson JRmore info...
7  GA N7-N1,amino carbonylAgalarov SC, Sridhar Prasad G, Funke PM, Stout CD, Williamson JRmore info...
8  GG carbonyl-imino (1 bond)Agalarov SC, Sridhar Prasad G, Funke PM, Stout CD, Williamson JRmore info...
9  GGC amino-carbonyl(G), N3-amino(C); Watson-CrickAgalarov SC, Sridhar Prasad G, Funke PM, Stout CD, Williamson JRmore info...
10  GU imino-2-carbonyl (1 bond)Allain FH, Varani Gmore info...
11  GU wobbleAllain FH, Varani Gmore info...
12  GU wobbleAllain FH, Varani Gmore info...
13  AUA amino-2-carbonyl,2-carbonyl-amino; N1-aminoAmarasinghe GK, De Guzman RN, Turner RB, Summers MFmore info...
14  GU wobbleAnderson AC, O'Neil RH, Filman DJ, Frederick CAmore info...
15  UC 4-carbonyl-aminoAnderson AC, O'Neil RH, Filman DJ, Frederick CAmore info...
16  GA shearedBaba S, Kajikawa M, Okada N, Kawai Gmore info...
17  GU wobbleBaeyens KJ, De Bondt HL, Holbrook SRmore info...
18  UU imino-carbonylBaeyens KJ, De Bondt HL, Holbrook SRmore info...
19  AA N7-aminoBaeyens KJ, De Bondt HL, Pardi A, Holbrook SRmore info...
20  GA shearedBaeyens KJ, De Bondt HL, Pardi A, Holbrook SRmore info...
21  AA amino-N3 (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
22  AA amino-N3 (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
23  AA amino-N3 (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
24  AA amino-N3 (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
25  AA N1-amino (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
26  AA N1-amino (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
27  AA N1-amino (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
28  AA N1-amino (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
29  AA N1-amino (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
30  AA N1-amino (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
31  AA N1-amino, symmetricBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
32  AA N1-amino, symmetricBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
33  AA N1-amino, symmetricBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
34  AA N1-amino, symmetricBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
35  AA N1-amino, symmetricBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
36  AA N1-amino, symmetricBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
37  AA N7-aminoBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
38  AA N7-aminoBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
39  AA N7-aminoBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
40  AA N7-aminoBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
41  AA N7-aminoBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
42  AA N7-amino (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
43  AA N7-amino (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
44  AA N7-amino, symmetricBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
45  AA N7-amino, symmetricBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
46  AA N7-amino, symmetricBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
47  AA N7-amino, symmetricBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
48  AA N7-amino, symmetricBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
49  AA N7-amino, symmetricBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
50  AA N7-amino, symmetricBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
51  AA N7-amino, symmetricBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
52  AA N7-amino, symmetricBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
53  AA N7-amino, symmetricBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
54  AA N7-amino, symmetricBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
55  AA N7-amino, symmetricBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
56  AA N7-amino, symmetricBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
57  AAA amino-N1; N7-amino symmetricBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
58  AAA amino-N1; N7-amino symmetricBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
59  AAA N1-amino; N7-amino symmetricBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
60  AAA N1-amino; N7-amino symmetricBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
61  AAAU N7-amino, symmetric; C2H-N3; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
62  AAC amino-N3; N1-amino, C2H-N3Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
63  AAG amino-N1; shearedBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
64  AAG amino-N7; N1-amino; amino-N3; N1-aminoBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
65  AAGC C2-H-N7, N3-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
66  AAGC N1-amino,amino-N7; N3-amino;Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
67  AAGC N7-amino,symmetric;Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
68  AAGU N7-amino, symmetric; N1-maino; wobbleBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
69  AAU amino-N1,N7-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
70  AAU N1-amino symmetric; reverse HoogsteenBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
71  AAU N1-amino symmetric; reverse HoogsteenBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
72  AAU N1-amino; reverse HoogsteenBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
73  AAU N1-amino; reverse HoogsteenBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
74  AAU N3-amino; N7-iminoBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
75  AAU N7-amino, symmetric; reverse Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
76  AC amino(A); N3(C)-carbonyl (bifurcated)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
77  AC amino,2-carbonyl (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
78  AC amino,2-carbonyl (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
79  AC amino,2-carbonyl (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
80  AC amino,2-carbonyl (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
81  AC amino,2-carbonyl (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
82  AC amino,2-carbonyl (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
83  AC amino,2-carbonyl (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
84  AC amino,2-carbonyl (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
85  AC amino,2-carbonyl (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
86  AC amino,2-carbonyl (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
87  AC amino-N3 (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
88  AC amino-N3 (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
89  AC C2-H-N3Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
90  AC N1-amino (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
91  AC N1-amino (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
92  AC N1-amino (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
93  AC N1-amino (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
94  AC N1-amino (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
95  AC N1-amino (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
96  AC N3-amino (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
97  AC N3-amino (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
98  AC N3-amino (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
99  AC N3-amino (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
100  AC N3-amino (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
101  AC N3-amino (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
102  AC N3-amino (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
103  AC N3-amino (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
104  AC N7-amino (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
105  AC N7-amino (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
106  AC N7-amino (1 bond)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
107  AC reverse HoogsteenBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
108  AC reverse HoogsteenBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
109  AC reverse HoogsteenBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
110  AC reverse HoogsteenBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
111  AC reverse HoogsteenBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
112  ACA amino-carbonyl; amino-N1Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
113  ACA amino-carbonyl; reverse HoogsteenBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
114  ACAU amino-carbonyl;reverese Hoogsteen; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
115  ACG amino-carbonyl; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
116  ACG amino-carbonyl; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
117  ACG amino-carbonyl; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
118  ACG amino-carbonyl; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
119  ACG amino-carbonyl; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
120  ACG amino-carbonyl; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
121  ACG amino-carbonyl; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
122  ACG N1-amino;Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
123  ACG N3-amino(C); Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
124  ACG N3-amino(C); Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
125  ACG N7-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
126  AG N3-amino, amino-N1Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
127  AGA amino-carbonyl; carbonyl amino (bifurcated)Ban N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
128  AGC amino-N3, N1-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
129  AGC amino-N3, N1-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
130  AGC amino-N3, N1-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
131  AGC N1-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
132  AGC N1-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
133  AGC N1-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
134  AGC N1-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
135  AGC N1-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
136  AGC N1-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
137  AGC N1-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
138  AGC N1-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
139  AGC N3-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
140  AGC N3-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
141  AGC N3-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
142  AGC N3-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
143  AGC N3-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
144  AGC N3-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
145  AGC N3-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
146  AGC N3-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
147  AGC N3-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
148  AGC N3-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
149  AGC N3-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
150  AGC N3-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
151  AGC N3-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
152  AGC N3-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
153  AGC N3-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
154  AGC N3-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
155  AGC N3-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
156  AGC N3-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
157  AGC N3-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
158  AGC N3-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
159  AGC N3-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
160  AGC N3-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
161  AGC N3-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
162  AGC N3-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
163  AGC N3-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
164  AGC N3-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
165  AGC N3-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
166  AGC N3-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
167  AGC N3-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
168  AGC N3-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
169  AGC N3-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
170  AGCU N1-amino;Watson-Crick;amino-2-carbonylBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
171  AGG N1-amino; carbonyl-aminoBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
172  AGGC N7-amino; carbonyl-amino; Watson-CrickBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
173  AGU amino-N3; amino-2-carbonylBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
174  AGU N3-amino; Reverse WobbleBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
175  AGU N3-amino; wobbleBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
176  AGU N3-amino; wobbleBan N, Nissen P, Hansen J, Moore PB, Steitz TAmore info...
177  AG