Non-canonical Base Pair Database | Individual Record Page 104

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NON-CANONICAL BASE PAIR DATABASE : Individual Record Page 104

Authors: Baeyens KJ, De Bondt HL, Holbrook SR

Citation: Structure of an RNA double helix including uracil-uracil base pairs in an internal loop Nat Struct Biol 2(1):56-62 January 01, 1995  [PDB link]

Base Pair Type: UU imino-carbonyl

Base Pair Category: Normal Purine-Purine and Pyrimidine-Pyrimidine Base Pairs; Cis Watson-Crick/Shallow groove

Sequence Context: 5'  3'
U-G,Wobble
U-U
U-U,imino-carbonyl
3'  5'

Structure: (GGACUUUGGUCC)2-duplex

Pucker Info: C3'-endo

Melting Point: *

Free Energy: *

Chemical Shift: *

Glycosidic Conf: *

Extra Info: *

Figure: UU imino-carbonyl