RNA World Informatics Phylogeny Database

NON-CANONICAL BASE PAIR DATABASE : Individual Record Page 1098

Authors:	Michiels PJ, Schouten CH, Hilbers CW, Heus HA
Citation:	Structure of the ribozyme substrate hairpin of Neurospora VS RNA: a close look at the cleavage site RNA 6(12):1821-1832 December 01, 2000  [PDB link]
Base Pair Type:	AC wobble
Base Pair Category:	Normal Purine-Pyrimidine Base Pairs; Cis Watson-Crick/Watson-Crick
Sequence Context:	5'  3' A-G, sheared A-C G-C,Watson-Crick 3'  5'
Structure:	Secondary structure of VSm1 substrate hairpin analog
Pucker Info:	all C3' endo
Melting Point:	*
Free Energy:	*
Chemical Shift:	Chemical shifts available in table
Glycosidic Conf:	all anti
Extra Info:	adenosine protonated at N1 position
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