Non-canonical Base Pair Database | Individual Record Page 1449

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Department of Biology and Biochemistry | University of Houston

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NON-CANONICAL BASE PAIR DATABASE : Individual Record Page 1449

Authors: Biou V, Yaremchuk A, Tukalo M, Cusack S

Citation: The 2.9 A crystal structure of T. thermophilus seryl-tRNA synthetase complexed with tRNA(Ser) Science 263(5152):1404-10 March 11, 1994  [PDB link]

Base Pair Type: AU reverse Hoogsteen

Base Pair Category: Normal Purine-Pyrimidine Base Pairs; Trans Hoogsteen/Shallow groove

Sequence Context: 5'  3'
G-G,amino-carbonyl,imino-N7
A-U
G G,*
3'  5'

Structure: Thermus Thermophilus tRNA (ser) complexed with seryl-tRNA synthetase

Pucker Info: All C3' endo

Melting Point: *

Free Energy: *

Chemical Shift: *

Glycosidic Conf: All anti

Extra Info: A14.U8 form a mismatch

Figure: AU reverse Hoogsteen