Non-canonical Base Pair Database | Individual Record Page 1580

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Department of Biology and Biochemistry | University of Houston

- Non-interactive : all records sorted by base pair type | authors' names.

- Summary table [Single page | Multiple pages].

- Structures of Base Pairs, Base Triples and Base Quadruples.

- "Database of non-canonical base pairs found in known RNA structures" [PDF format. Nucleic Acid Research, 2000 Jan 1; 28(1):375-376].

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NON-CANONICAL BASE PAIR DATABASE : Individual Record Page 1580

Authors: Ban N, Nissen P, Hansen J, Moore PB, Steitz TA

Citation: The complete atomic structure of the large ribosomal subunit at 2.4 A resolution. Science 289:905-20 August 11, 2000 [PDB link]

Base Pair Type: AAGC N7-amino,symmetric;Watson-Crick

Base Pair Category: Quadruple Base Interactions; Quadruples

Sequence Context: 5' G A(1355) A 3'
5' G A(643) G 3'
5' G G(902) U 3'
5' A C(762) C 3'

Structure: Atomic structure of the large subunit

Pucker Info: All C3' endo

Melting Point: *

Free Energy: *

Chemical Shift: *

Glycosidic Conf: All anti

Extra Info: Quadruple base interaction

Figure: AAGC N7-amino,symmetric;Watson-Crick