RNA World Informatics Phylogeny Database

NON-CANONICAL BASE PAIR DATABASE : Individual Record Page 1659

Authors:	Huppler A, Nikstad LJ, Allmann AM, Brow DA, Butcher SE
Citation:	Metal binding and base ionization in the U6 RNA intramolecular stem-loop structure Nat Struct Biol 9(6):431-5 June 01, 2002  [PDB link]
Base Pair Type:	AC wobble
Base Pair Category:	Normal Purine-Pyrimidine Base Pairs; Cis Watson-Crick/Watson-Crick
Sequence Context:	5'  3' C-U,* C-A C-G,Watson-Crick 3'  5'
Structure:	U6 stem loop RNA
Pucker Info:	All C3' endo
Melting Point:	*
Free Energy:	*
Chemical Shift:	*
Glycosidic Conf:	All anti
Extra Info:	C6.A18 form a mismatch
Figure: