RNA World Informatics Phylogeny Database

NON-CANONICAL BASE PAIR DATABASE : Individual Record Page 1686

Authors:	Harms J, Schluenzen F, Zarivach R, Bashan A, Gat S, Agmon I, Bartels H, Franceschi F, Yonath A
Citation:	High resolution structure of the large ribosomal subunit from a mesophilic eubacterium Cell 107(5):679-88 November 30, 2001  [PDB link]
Base Pair Type:	AU reverse Hoogsteen
Base Pair Category:	Normal Purine-Pyrimidine Base Pairs; Trans Hoogsteen/Shallow groove
Sequence Context:	5'  3' A G,* A-U A G,* 3'  5'
Structure:	Dienococcus Radiodurans 23S RNA
Pucker Info:	All C3' endo
Melting Point:	*
Free Energy:	*
Chemical Shift:	*
Glycosidic Conf:	All anti
Extra Info:	A513.U509 form a mismatch in a T-loop motif
Figure: