Non-canonical Base Pair Database | Individual Record Page 177

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Department of Biology and Biochemistry | University of Houston

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- "Database of non-canonical base pairs found in known RNA structures" [PDF format. Nucleic Acid Research, 2000 Jan 1; 28(1):375-376].

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NON-CANONICAL BASE PAIR DATABASE : Individual Record Page 177

Authors: Cate JH, Gooding AR, Podell E, Zhou K, Golden BL, Szewczak AA, Kundrot CE, Cech TR, Doudna JA

Citation: RNA tertiary structure mediation by adenosine platforms Science 273(5282):1696-9 September 20, 1996

Base Pair Type: AU reverse Hoogsteen

Base Pair Category: Normal Purine-Pyrimidine Base Pairs; Trans Hoogsteen/Shallow groove

Sequence Context: 5'  3'
A U,*
A-U
G-C,Watson-Crick
3'  5'

Structure: Group I intron ribozyme

Pucker Info: *

Melting Point: *

Free Energy: *

Chemical Shift: *

Glycosidic Conf: *

Extra Info: L5C

Figure: AU reverse Hoogsteen