Fox Lab
  Home | PI | People | Databases | Research | Publications | Links
Department of Biology and BiochemistryUniversity of Houston  


- Non-interactive : all records sorted by base pair type | authors' names.

- Interactive : search the database.

- Summary table [Single page | Multiple pages].

- Structures of Base Pairs, Base Triples and Base Quadruples.

- "Database of non-canonical base pairs found in known RNA structures" [PDF format. Nucleic Acid Research, 2000 Jan 1; 28(1):375-376].




RNA World

Informatics

Phylogeny

Database


NON-CANONICAL BASE PAIR DATABASE : Individual Record Page 224


Authors:Allain FH, Varani G
Citation:Structure of the P1 helix from group I self-splicing introns J Mol Biol 250(3):333-53 July 14, 1995  [PDB link]
Base Pair Type:GU wobble
Base Pair Category:Normal Purine-Pyrimidine Base Pairs; Cis Watson-Crick/Watson-Crick
Sequence Context:5'  3'
U-A,Watson-Crick
G-U
U-A,Watson-Crick
3'  5'
Structure:P1 helix from group I intron
Pucker Info:*
Melting Point:*
Free Energy:*
Chemical Shift:*
Glycosidic Conf:*
Extra Info:Recognition of the U.G by catalytic intron core
Figure:GU wobble


  Copyright © 2000 Fox Lab. All rights reserved.