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Department of Biology and BiochemistryUniversity of Houston  


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- "Database of non-canonical base pairs found in known RNA structures" [PDF format. Nucleic Acid Research, 2000 Jan 1; 28(1):375-376].




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NON-CANONICAL BASE PAIR DATABASE : Individual Record Page 228


Authors:Zimmermann GR, Shields TP, Jenison RD, Wick CL, Pardi A
Citation:A semiconserved residue inhibits complex formation by stabilizing interactions in the free state of a theophylline-binding RNA Biochemistry 37(25):9186-92 June 23, 1998  
Base Pair Type:AC wobble
Base Pair Category:Normal Purine-Pyrimidine Base Pairs; Cis Watson-Crick/Watson-Crick
Sequence Context:5'  3'
U-A,Watson-Crick
A-C
C-G,Watson-Crick
3'  5'
Structure:Theophylline binding RNA
Pucker Info:*
Melting Point:*
Free Energy:*
Chemical Shift:C2-13C of A7~147
Glycosidic Conf:*
Extra Info:Theophylline binding prevented by the A+.C pair
Figure:AC wobble


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