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- Non-interactive : all records sorted by base pair type | authors' names.

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- Summary table [Single page | Multiple pages].

- Structures of Base Pairs, Base Triples and Base Quadruples.

- "Database of non-canonical base pairs found in known RNA structures" [PDF format. Nucleic Acid Research, 2000 Jan 1; 28(1):375-376].




RNA World

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Database


NON-CANONICAL BASE PAIR DATABASE : Individual Record Page 390


Authors:Nissen P, Thirup S, Kjeldgaard M, Nyborg J
Citation:The crystal structure of Cys-tRNACys-EF-Tu-GDPNP reveals general and specific features in the ternary complex and in tRNA Structure Fold Des 7(2):143-56 February 15, 1999  [PDB link]
Base Pair Type:AT reverse Hoogsteen
Base Pair Category:Normal Purine-Pyrimidine Base Pairs; Trans Watson-Crick/Hoogsteen
Sequence Context:5'  3'
G Y,*
A-T
C G,*
3'  5'
Structure:tRNA (Cys)
Pucker Info:*
Melting Point:*
Free Energy:*
Chemical Shift:*
Glycosidic Conf:*
Extra Info:Occurs in the TpsiC loop
Figure:AT reverse Hoogsteen


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