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Department of Biology and BiochemistryUniversity of Houston  


- Non-interactive : all records sorted by base pair type | authors' names.

- Interactive : search the database.

- Summary table [Single page | Multiple pages].

- Structures of Base Pairs, Base Triples and Base Quadruples.

- "Database of non-canonical base pairs found in known RNA structures" [PDF format. Nucleic Acid Research, 2000 Jan 1; 28(1):375-376].




RNA World

Informatics

Phylogeny

Database


NON-CANONICAL BASE PAIR DATABASE : Individual Record Page 48


Authors:Vogtherr M, Schubel H, Limmer S
Citation:Structural and dynamic helix geometry alterations induced by mismatch base pairs in double-helical RNA. FEBS Letters 429(1):21-6 June 05, 1998  
Base Pair Type:AC wobble
Base Pair Category:Normal Purine-Pyrimidine Base Pairs; Cis Watson-Crick/Watson-Crick
Sequence Context:5'  3'
C-G,Watson-Crick
A-C
C-G,Watson-Crick
3'  5'
Structure:Acceptor helix model of tRNA (Ala)
Pucker Info:*
Melting Point:*
Free Energy:*
Chemical Shift:*
Glycosidic Conf:*
Extra Info:*
Figure:AC wobble


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