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RNA World
Informatics Phylogeny Database |
NON-CANONICAL BASE PAIR DATABASE : Summary Note: the duplicated entries (with different data available) are grouped together in the table.
# Base Pair Type Sequence Context Structure Details 
1
5' 3'
3' 5'2 AC reverse Hoogsteen
5' 3'
A-A,amino-N7
C-A
A-A,amino-N3,symmetric
3' 5'Structure of the 30S ribosomal subunit 3 AC reverse Hoogsteen
5' 3'
A-U,reverse Hoogsteen
A-C
G-C,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 4 AC reverse Hoogsteen
5' 3'
C A,*
A-C
C U,*
3' 5'Structure of the 30S ribosomal subunit 5 AC reverse Hoogsteen
5' 3'
C C,*
A-C
C A,*
3' 5'Atomic structure of the large ribosomal subunit 6 AC reverse Hoogsteen
5' 3'
C C,*
A-C
U U,*
3' 5'Atomic structure of the large ribosomal subunit 7 AC reverse Hoogsteen
5' 3'
C G,*
A-U
A C,*
3' 5'tRNA (Val) 8 AC reverse Hoogsteen
5' 3'
C-A,amino-N1
A-C
A-U,reverse Hoogsteen
3' 5'Structure of the 30S ribosomal subunit 9 AC reverse Hoogsteen
5' 3'
C-A,carbonyl-amino (1 bond)
A-C
G-G,amino-carbonyl (1 bond)
3' 5'4.5S RNA, domain IV, loopA 10 AC reverse Hoogsteen
5' 3'
C-A,carbonyl-amino(1bond)
A-C
G-G,carbonyl-amino(1 bond)
3' 5'dodecamer 11 AC reverse Hoogsteen
5' 3'
C-A,carbonyl-amino
A-C
G-G,carbonyl-amino
3' 5'SRP19 12 AC reverse Hoogsteen
5' 3'
C-A,Carbonyl-amino
A-C
G-G,Carbonyl-amino
3' 5'Ribonucleoprotein core of the SRP 13 AC reverse Hoogsteen
5' 3'
G A,*
A-C
A-A,amino-N1,N7-amino
3' 5'Atomic structure of the large ribosomal subunit 14 AC reverse Hoogsteen
5' 3'
G-A,sheared
A-C
G-G,amino-carbonyl(1 bond)
3' 5'Atomic structure of the large ribosomal subunit 15 AC reverse Hoogsteen
5' 3'
U C,*
C-A
A G,*
3' 5'Structure of the 30S ribosomal subunit 16 AC reverse Hoogsteen
5' 3'
U G,*
A-C
A U,*
3' 5'Atomic structure of the large ribosomal subunit 17 AC reverse Hoogsteen
5' 3'
U-A,reverse Hoogsteen
A-C
A-A,N7-amino
3' 5'Structure of the 30S ribosomal subunit 18 AC wobble
5' 3'
A U,*
A-C
U-A,Watson-Crick
3' 5'Anticodon loop of tRNA (Lys) 19 AC wobble
5' 3'
A-G, sheared
A-C
G-C,Watson-Crick
3' 5'Secondary structure of VSm1 substrate hairpin analog 20 AC wobble
5' 3'
A-G,Sheared
A-C
G-C,Watson-Crick
3' 5'Loop B of hairpin ribozyme from tobacco ringspot virus 21 AC wobble
5' 3'
A-G,sheared
A-C
G-C,Watson-Crick
3' 5'VS ribozyme substarte RNA 22 AC wobble
5' 3'
A-U,Watson-Crick
A-C
U-A,Watson-Crick
3' 5'(GCAGACUUAAAUCUGC)2-duplex 23 AC wobble
5' 3'
A-U,Watson-Crick
C-A
U t6A, *
3' 5'tRNA Lys3 UUU anticodon stem/loop(ASL lys3 UUU) 24 AC wobble
5' 3'
C-A,Wobble
A-C
G-C,Watson-Crick
3' 5'RNA internal loop with tandem C-A+ mismatches 25 AC wobble
5' 3'
C-G, Watson-Crick
A-C
A-U, Watson-Crick
3' 5'Natural guanine responsive riboswitch complexed with hypoxanthine 26 AC wobble
5' 3'
C-G, Watson-Crick
A-C
A-U, Watson-Crick
3' 5'Bacillus subtilis xpt G-Riboswitch G complex 27 AC wobble
5' 3'
C-G,Watson-Crick
A-C
C-G,Watson-Crick
3' 5'Acceptor helix model of tRNA (Ala) 28 AC wobble
5' 3'
C-G,Watson-Crick
C-A
U-G,Wobble
3' 5'RNA helix recognized by zinc-finger protein 29 AC wobble
5' 3'
C-U,*
C-A
C-G,Watson-Crick
3' 5'U6 stem loop RNA 30 AC wobble
5' 3'
G G,*
A-C
G-C,Watson-Crick
3' 5'Leadzyme RNA 31 AC wobble
5' 3'
G U,*
A-C
U-A,4-carbonyl-amino (1 bond)
3' 5'Dienococcus Radiodurans 23S RNA 32 AC wobble
5' 3'
G-C, Watson-Crick
A-C
A-G, imino
3' 5'Group I Intron 33 AC wobble
5' 3'
G-C, Watson-Crick
A-C
U C,*
3' 5'U6 RNA 34 AC wobble
5' 3'
G-C,Watson-Crick
A-C
A-C,Wobble
3' 5'SRP 19 splicing domain 35 AC wobble
5' 3'
G-C,Watson-Crick
A-C
A-U,Watson-Crick
3' 5'RNA helix recognized by zinc-finger protein 36 AC wobble
5' 3'
G-C,Watson-Crick
A-C
C-A,wobble
3' 5'SRP 19 splicing domain 37 AC wobble
5' 3'
G-C,Watson-Crick
A-C
C-A,Wobble
3' 5'Helix 6 of human SRP 38 AC wobble
5' 3'
G-C,Watson-Crick
A-C
U-A,Watson-Crick
3' 5'RNA hairpin loop 39 AC wobble
5' 3'
U-A,Watson-Crick
A-C
C-G,Watson-Crick
3' 5'Theophylline binding RNA 40 AT reverse Hoogsteen
5' 3'
A Y,*
A-T
U G,*
3' 5'Yeast tRNA (Asp) 41 AT reverse Hoogsteen
5' 3'
A PSU,*
A-T
A G,*
3' 5'Methionyl-tRNAFMET formyltransferase 42 AT reverse Hoogsteen
5' 3'
G Y,*
A-T
C G,*
3' 5'tRNA (Cys) 43 AT reverse Hoogsteen
5' 3'
G Y,*
A-T
U G,*
3' 5'Yeast tRNA (Phe) AT reverse Hoogsteen
5' 3'
G Y,*
A-T
U G,*
3' 5'Yeast tRNA (Phe) more info... 44 AU reverse Hoogsteen
5' 3'
* C,*
A-U
G-A,sheared
3' 5'Group II intron branch site AU reverse Hoogsteen
5' 3'
* C,*
A-U
G-A,sheared
3' 5'Group II intron branch site more info... 45 AU reverse Hoogsteen
5' 3'
A C,*
A-U
A C,*
3' 5'Atomic structure of the large ribosomal subunit AU reverse Hoogsteen
5' 3'
A C,*
A-U
A C,*
3' 5'Atomic structure of the large ribosomal subunit more info... 46 AU reverse Hoogsteen
5' 3'
A C,*
A-U
A G,*
3' 5'Dienococcus Radiodurans 23S RNA 47 AU reverse Hoogsteen
5' 3'
A C,*
A-U
A-G,N7-amino
3' 5'Atomic structure of the large ribosomal subunit 48 AU reverse Hoogsteen
5' 3'
A G,*
A-U
A G,*
3' 5'Dienococcus Radiodurans 23S RNA 49 AU reverse Hoogsteen
5' 3'
A G,*
A-U
A-C,amino-N3
3' 5'Structure of the 30S ribosomal subunit 50 AU reverse Hoogsteen
5' 3'
A G,*
A-U
C U,*
3' 5'Atomic structure of the large ribosomal subunit 51 AU reverse Hoogsteen
5' 3'
A U,*
A-U
A G,*
3' 5'tRNA (tyr) 52 AU reverse Hoogsteen
5' 3'
A U,*
A-U
G A,*
3' 5'Atomic structure of the large ribosomal subunit 53 AU reverse Hoogsteen
5' 3'
A U,*
A-U
G C,*
3' 5'Atomic structure of the large ribosomal subunit 54 AU reverse Hoogsteen
5' 3'
A U,*
A-U
G G,*
3' 5'tRNA (Ile) 55 AU reverse Hoogsteen
5' 3'
A U,*
A-U
G G,*
3' 5'tRNA (Val) 56 AU reverse Hoogsteen
5' 3'
A U,*
A-U
G-C,Watson-Crick
3' 5'Group I intron ribozyme 57 AU reverse Hoogsteen
5' 3'
A-A,N3-amino(1 bond)
A-U
A G,*
3' 5'Atomic structure of the large ribosomal subunit 58 AU reverse Hoogsteen
5' 3'
A-A,N7-amino
A-U
G C,*
3' 5'Atomic structure of the large ribosomal subunit 59 AU reverse Hoogsteen
5' 3'
A-A,N7-amino
A-U
G-A,Sheared
3' 5'SRL of 28S rRNA 60 AU reverse Hoogsteen
5' 3'
A-G,sheared
A-U
A-A,N3-amino
3' 5'Structure of the 30S ribosomal subunit 61 AU reverse Hoogsteen
5' 3'
A-U,amino-2-carbonyl(1 bond)
A-U
C G,*
3' 5'HCV-IRES RNA tertiary domain 62 AU reverse Hoogsteen
5' 3'
C A,*
A-U
A C,*
3' 5'Atomic structure of the large ribosomal subunit 63 AU reverse Hoogsteen
5' 3'
C A,*
A-U
G G,*
3' 5'Prolyl-tRNA Synthetase form Thermus Thermophilus 64 AU reverse Hoogsteen
5' 3'
C A,*
A-U
G U,*
3' 5'Yeast tRNA (Phe) 65 AU reverse Hoogsteen
5' 3'
C C,*
A-U
G-A,sheared
3' 5'Atomic structure of the large ribosomal subunit 66 AU reverse Hoogsteen
5' 3'
C G,*
A-U
A G,*
3' 5'Atomic structure of the large ribosomal subunit 67 AU reverse Hoogsteen
5' 3'
C-A,reverse Hoogsteen
A-U
A-C,reverse Hoogsteen
3' 5'Structure of the 30S ribosomal subunit 68 AU reverse Hoogsteen
5' 3'
C-C,carbonyl-amino
A-U
A-G,sheared
3' 5'Atomic structure of the large ribosomal subunit 69 AU reverse Hoogsteen
5' 3'
C-G,Watson-Crick
G-U
G-C,Watson-Crick
3' 5'Dienococcus Radiodurans 23S RNA 70 AU reverse Hoogsteen
5' 3'
G A,*
A-U
A A,*
3' 5'Specificity domain of RNAse P 71 AU reverse Hoogsteen
5' 3'
G A,*
A-U
A C,*
3' 5'Dienococcus Radiodurans 23S RNA AU reverse Hoogsteen
5' 3'
G A,*
A-U
A C,*
3' 5'Dienococcus Radiodurans 23S RNA more info... 72 AU reverse Hoogsteen
5' 3'
G A,*
A-U
A C,*
3' 5'Atomic structure of the large ribosomal subunit 73 AU reverse Hoogsteen
5' 3'
G A,*
A-U
A G,*
3' 5'Atomic structure of the large ribosomal subunit 74 AU reverse Hoogsteen
5' 3'
G A,*
A-U
A-G,amino-N3
3' 5'Structure of the 30S ribosomal subunit 75 AU reverse Hoogsteen
5' 3'
G A,*
A-U
C-C,*
3' 5'57nt 16S ribosomal RNA 76 AU reverse Hoogsteen
5' 3'
G A,*
A-U
G A,*
3' 5'Dienococcus Radiodurans 23S RNA 77 AU reverse Hoogsteen
5' 3'
G A,*
A-U
G A,*
3' 5'Structure of the 30S ribosomal subunit 78 AU reverse Hoogsteen
5' 3'
G A,*
A-U
G U,*
3' 5'Atomic structure of the large ribosomal subunit 79 AU reverse Hoogsteen
5' 3'
G A,*
A-U
U C,*
3' 5'Dienococcus Radiodurans 23S RNA 80 AU reverse Hoogsteen
5' 3'
G A,*
A-U
U G,*
3' 5'Dienococcus Radiodurans 23S RNA 81 AU reverse Hoogsteen
5' 3'
G A,*
U-A
A-G,amino-N3,N7-amino
3' 5'Structure of the 30S ribosomal subunit 82 AU reverse Hoogsteen
5' 3'
G C,*
A-U
A G,*
3' 5'Atomic structure of the large ribosomal subunit AU reverse Hoogsteen
5' 3'
G C,*
A-U
A G,*
3' 5'Atomic structure of the large ribosomal subunit more info... 83 AU reverse Hoogsteen
5' 3'
G C,*
A-U
A-A,amino-N1
3' 5'Atomic structure of the large ribosomal subunit 84 AU reverse Hoogsteen
5' 3'
G C,*
A-U
C A,*
3' 5'Structure of the 30S ribosomal subunit 85 AU reverse Hoogsteen
5' 3'
G C,*
A-U
C C,*
3' 5'Atomic structure of the large ribosomal subunit 86 AU reverse Hoogsteen
5' 3'
G G,*
5MU-1MA
PSU A,*
3' 5'Arginyl-tRNA Synthetase 87 AU reverse Hoogsteen
5' 3'
G G,*
A-U
A C,*
3' 5'Atomic structure of the large ribosomal subunit AU reverse Hoogsteen
5' 3'
G G,*
A-U
A C,*
3' 5'Atomic structure of the large ribosomal subunit more info... 88 AU reverse Hoogsteen
5' 3'
G G,*
A-U
A G,*
3' 5'Atomic structure of the large ribosomal subunit 89 AU reverse Hoogsteen
5' 3'
G G,*
A-U
C C,*
3' 5'Structure of the 30S ribosomal subunit 90 AU reverse Hoogsteen
5' 3'
G G,*
A-U
C-G,amino-carbonyl
3' 5'Structure of the 30S ribosomal subunit 91 AU reverse Hoogsteen
5' 3'
G G,*
A-U
G G,*
3' 5'Atomic structure of the large ribosomal subunit 92 AU reverse Hoogsteen
5' 3'
G Y,*
A-D
C A,*
3' 5'tRNA (Thr) 93 AU reverse Hoogsteen
5' 3'
G U,*
A-U
A G,*
3' 5'tRNA (Glu) 94 AU reverse Hoogsteen
5' 3'
G U,*
A-U
A G,*
3' 5'tRNA apatamer 95 AU reverse Hoogsteen
5' 3'
G-A,amino-N7(1 bond)
A-U
A C,*
3' 5'Atomic structure of the large ribosomal subunit 96 AU reverse Hoogsteen
5' 3'
G-A,amino-N7(1 bond)
A-U
G A,*
3' 5'Dienococcus Radiodurans 23S RNA 97 AU reverse Hoogsteen
5' 3'
G-A,Sheared,
A-U
G-G,carbonyl-imino:amino
3' 5'5S rRNA loop E 98 AU reverse Hoogsteen
5' 3'
G-A,Sheared
A-U
A A,*
3' 5'FMN-binding RNA aptamer 99 AU reverse Hoogsteen
5' 3'
G-A,sheared
A-U
3' 5'Structure of the 30S ribosomal subunit 100 AU reverse Hoogsteen
5' 3'
G-A,sheared
A-U
A G,*
3' 5'Atomic structure of the large ribosomal subunit 101 AU reverse Hoogsteen
5' 3'
G-A,Sheared
A-U
A G,*
3' 5'Atomic structure of the large ribosomal subunit 102 AU reverse Hoogsteen
5' 3'
G-A,Sheared
A-U
A G,*
3' 5'Restrictocin-inhibitor complexes 103 AU reverse Hoogsteen
5' 3'
G-A,sheared
A-U
A G,*
3' 5'Atomic structure of the large ribosomal subunit AU reverse Hoogsteen
5' 3'
G-A,sheared
A-U
A G,*
3' 5'Atomic structure of the large ribosomal subunit more info... AU reverse Hoogsteen
5' 3'
G-A,sheared
A-U
A G,*
3' 5'Atomic structure of the large ribosomal subunit more info... 104 AU reverse Hoogsteen
5' 3'
G-A,sheared
A-U
A G,*
3' 5'Dienococcus Radiodurans 23S RNA 105 AU reverse Hoogsteen
5' 3'
G-A,sheared
A-U
A G,*
3' 5'Atomic structure of the large ribosomal subunit (5S) 106 AU reverse Hoogsteen
5' 3'
G-A,Sheared
A-U
A G,*
3' 5'SRL of 28S rRNA 107 AU reverse Hoogsteen
5' 3'
G-A,sheared
A-U
A G,*
3' 5'SRP19 108 AU reverse Hoogsteen
5' 3'
G-A,Sheared
A-U
A G,*
3' 5'5S rRNA loop E 109 AU reverse Hoogsteen
5' 3'
G-A,sheared
A-U
A G,*
3' 5'Atomic structure of the large ribosomal subunit 110 AU reverse Hoogsteen
5' 3'
G-A,Sheared
A-U
A G,*
3' 5'SRL of 28S rRNA 111 AU reverse Hoogsteen
5' 3'
G-A,sheared
A-U
A-A,N7-amino,symetrical
3' 5'Atomic structure of the large ribosomal subunit 112 AU reverse Hoogsteen
5' 3'
G-A,sheared
A-U
3' 5'Dienococcus Radiodurans 23S RNA AU reverse Hoogsteen
5' 3'
G-A,sheared
A-U
3' 5'Dienococcus Radiodurans 23S RNA more info... 113 AU reverse Hoogsteen
5' 3'
G-A,sheared
A-U
C G,*
3' 5'Atomic structure of the large ribosomal subunit 114 AU reverse Hoogsteen
5' 3'
G-A,Sheared
A-U
C G,*
3' 5'Atomic structure of the large ribosomal subunit 115 AU reverse Hoogsteen
5' 3'
G-A,sheared
A-U
G-A,sheared
3' 5'Structure of the 30S ribosomal subunit 116 AU reverse Hoogsteen
5' 3'
G-A,Sheared
A-U
G-G,carbonyl-imino:amino
3' 5'5S rRNA loop E 117 AU reverse Hoogsteen
5' 3'
G-A,sheared
A-U
U-G,2-carbonyl-amino
3' 5'Structure of the 30S ribosomal subunit 118 AU reverse Hoogsteen
5' 3'
G-A,Sheared
A-U
U-G,4-carbonyl-imino:amino
3' 5'5S rRNA loop E AU reverse Hoogsteen
5' 3'
G-A,Sheared
A-U
U-G,4-carbonyl-imino:amino
3' 5'5S rRNA loop E more info... 119 AU reverse Hoogsteen
5' 3'
G-A,Sheared
A-U
U-G,carbonyl-imino:amino,bifurcated
3' 5'5S rRNA loop E 120 AU reverse Hoogsteen
5' 3'
G-C,Waston-Crick
A-U
G-G-C;amino-carbonyl(G),N3-amino(C);Watson-Crick
3' 5'16S rRNA of T. thermophilus, Tth T4 RNA, helix 22" 121 AU reverse Hoogsteen
5' 3'
G-G,2-amino-N7(G),2-amino-carbonyl(G);Watson-Crick;N3(G)-carbonyl(C)
A-U
C C,*
3' 5'16S rRNA of T.thermophilus, Helix22 122 AU reverse Hoogsteen
5' 3'
G-G,amino-carbonyl,imino-N7
A-U
G G,*
3' 5'Thermus Thermophilus tRNA (ser) complexed with seryl-tRNA synthetase 123 AU reverse Hoogsteen
5' 3'
Y A,*
A-U
A A,*
3' 5'Yeast tRNA (Asp) 124 AU reverse Hoogsteen
5' 3'
PSU G,*
1MA-5MU
G U,*
3' 5'Yeast Phenylalanine tRNA 125 AU reverse Hoogsteen
5' 3'
U A,*
A-U
A G,*
3' 5'Structure of the 30S ribosomal subunit 126 AU reverse Hoogsteen
5' 3'
U A,*
A-U
G G,*
3' 5'Atomic structure of the large ribosomal subunit 127 AU reverse Hoogsteen
5' 3'
U A,*
A-U
U C,*
3' 5'Group I Intron 128 AU reverse Hoogsteen
5' 3'
U C,*
A-U
U A,*
3' 5'Group I Intron 129 AU reverse Hoogsteen
5' 3'
U G,*
A-U
A C,*
3' 5'Structure of the 30S ribosomal subunit 130 AU reverse Hoogsteen
5' 3'
U G,*
A-U
A G,*
3' 5'Atomic structure of the large ribosomal subunit 131 AU reverse Hoogsteen
5' 3'
U G,*
A-U
C-G,Watson-Crick
3' 5'Diels-Alder ribozyme 132 AU reverse Hoogsteen
5' 3'
U G,*
U-A
A C,*
3' 5'Yeast Phenylalanine tRNA 133 AU reverse Hoogsteen
5' 3'
U U,*
A-U
U G,*
3' 5'Atomic structure of the large ribosomal subunit 134 AU reverse Hoogsteen
5' 3'
U-A,N7-imino
A-U
U-C, *
3' 5'Group I Intron 135 CG Watson-Crick
2
5' 3'
U-A, Watson-Crick
G-C
A-U, Watson-Crick
3' 5'Group I Intron 136 GC carbonyl-amino, imino-N3
5' 3'
A-U, Watson-Crick
G-C
A U,*
3' 5'Group I Intron 137 GC carbonyl-amino, imino-N3
5' 3'
C G,*
G-C
U-A,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 138 GC carbonyl-amino, imino-N3
5' 3'
G-C,Watson-Crick
G-C
U-A,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit (5S) 139 GC imino-N3; amino-carbonyl
5' 3'
A-C,amino-carbonyl
G-C
A-U,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 140 GC imino-N3; amino-carbonyl
5' 3'
G-C,Watson-Crick
G-C
C-G,N3-amino
3' 5'tRNA (Val) 141 GC imino-N3; amino-carbonyl
5' 3'
G-C,Watson-Crick
G-C
U G,*
3' 5'Atomic structure of the large ribosomal subunit 142 GU N3-imino; amino-4-carbonyl
5' 3'
A-G,N1-amino(1 bond)
G-U
U G,*
3' 5'Specificity domain of RNAse P 143 GU N3-imino; amino-4-carbonyl
5' 3'
U C,*
G-U
A A,*
3' 5'Atomic structure of the large ribosomal subunit 144 GU wobble
5' 3'
G-U
U-G, Wobble
3' 5'Group I Intron 145 GU wobble
5' 3'
* *,*
G-U
C-G,Watson-Crick
3' 5'P4-P6 model regiond of group I intron 146 GU wobble
5' 3'
* *,*
G-U
G-C,Watson-Crick
3' 5'F7 RNA aptamer complexed with protein target 147 GU wobble
5' 3'
* *,*
G-U
G-C,Watson-Crick
3' 5'Helix 6 of human SRP 148 GU wobble
5' 3'
* *,*
G-U
G-C,Watson-Crick
3' 5'Hepatitis delta virus ribozyme 149 GU wobble
5' 3'
A A,*
G-U
A-U,Watson-Crick
3' 5'GAAA tetraloop receptor 150 GU wobble
5' 3'
A A,*
G-U
C G,*
3' 5'Atomic structure of the large ribosomal subunit 151 GU wobble
5' 3'
A A,*
G-U
C-G,Watson-Crick
3' 5'P5abc sub-domain of group I intron 152 GU wobble
5' 3'
A A,*
G-U
C-G,Watson-Crick
3' 5'Bulge loop from group I intron 153 GU wobble
5' 3'
A A,*
G-U
G-C, Waston-Crick
3' 5'Group I Intron 154 GU wobble
5' 3'
A A,*
G-U
G-C,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 155 GU wobble
5' 3'
A A,*
G-U
G-C,Watson-Crick
3' 5'RNA pseudoknot of Mouse mammaery tumor virus 156 GU wobble
5' 3'
A A,*
G-U
U-A,Watson-Crick
3' 5'Group I intron ribozyme 157 GU wobble
5' 3'
A C,*
G-U
C-G,Watson-Crick
3' 5'RNA domain of SRP 158 GU wobble
5' 3'
A C,*
G-U
C-G,Watson-Crick
3' 5'Conserved internal loop of SRP RNA 159 GU wobble
5' 3'
A C,*
G-U
C-G,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 160 GU wobble
5' 3'
A G,*
G-U
C-G,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit GU wobble
5' 3'
A G,*
G-U
C-G,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit more info... 161 GU wobble
5' 3'
A G,*
G-U
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit GU wobble
5' 3'
A G,*
G-U
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit more info... 162 GU wobble
5' 3'
A G,*
G-U
G-C,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 163 GU wobble
5' 3'
A G,*
G-U
G-C,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 164 GU wobble
5' 3'
A G,*
G-U
G-C,Watson-Crick
3' 5'57nt 16S ribosomal RNA 165 GU wobble
5' 3'
A G,*
G-U
U A,*
3' 5'Yeast tRNA (Asp) 166 GU wobble
5' 3'
A G,*
G-U
U-A, Watson-Crick
3' 5'Group I Intron 167 GU wobble
5' 3'
A G,*
G-U
U-A,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 168 GU wobble
5' 3'
A G,*
G-U
U-A,Watson-Crick
3' 5'P5abc sub-domain of group I intron 169 GU wobble
5' 3'
A U,*
G-U
C-G,Watson-Crick
3' 5'RNA pseudoknot 170 GU wobble
5' 3'
A U,*
G-U
C-G,Watson-Crick
3' 5'Dienococcus Radiodurans 23S RNA 171 GU wobble
5' 3'
A U,*
G-U
C-G,Watson-Crick
3' 5'Group I intron ribozyme 172 GU wobble
5' 3'
A-A,*
G-U
G-C,Watson-Crick
3' 5'Group II sp intron 173 GU wobble
5' 3'
A-A,*
G-U
U-G,*
3' 5'Group I Intron 174 GU wobble
5' 3'
A-C,amino-carbonyl (1 bond)
G-U
C-G,Watson-Crick
3' 5'4.5S RNA, domain IV, helix b 175 GU wobble
5' 3'
A-C,amino-carbonyl
G-U
G-C,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 176 GU wobble
5' 3'
A-C,amino-N1
G-U
C-G,Watson-Crick
3' 5'tRNA (Cys) 177 GU wobble
5' 3'
A-G, N1-N7,amino-carbonyl
G-U
3' 5'Group I Intron 178 GU wobble
5' 3'
A-G, sheared
G-U
U-A, Watson-Crick
3' 5'Group I Intron 179 GU wobble
5' 3'
A-G,*
G-U
U-A Hoogsteen
3' 5'Group I Intron 180 GU wobble
5' 3'
A-G,amino-carbonyl
G-U
C-G,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 181 GU wobble
5' 3'
A-G,amino-carbonyl
U-G
G-U,Wobble
3' 5'Structure of the 30S ribosomal subunit 182 GU wobble
5' 3'
A-G,Imino
G-U
G-C,Watson-Crick
3' 5'16S rRNA of T.thermophilus, Helix22 183 GU wobble
5' 3'
A-G,N7-amino,amino-N3
G-U
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 184 GU wobble
5' 3'
A-G,N7-amino,amino-N3
G-U
G-C,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit GU wobble
5' 3'
A-G,N7-amino,amino-N3
G-U
G-C,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit more info... 185 GU wobble
5' 3'
A-G,sheared
G-U
A-U,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 186 GU wobble
5' 3'
A-G,sheared
G-U
C A,*
3' 5'Atomic structure of the large ribosomal subunit 187 GU wobble
5' 3'
A-G,sheared
G-U
C-G,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit GU wobble
5' 3'
A-G,sheared
G-U
C-G,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit more info... 188 GU wobble
5' 3'
A-G,sheared
G-U
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit GU wobble
5' 3'
A-G,sheared
G-U
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit more info... GU wobble
5' 3'
A-G,sheared
G-U
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit more info... 189 GU wobble
5' 3'
A-G,sheared
G-U
G-C,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 190 GU wobble
5' 3'
A-G,sheared
G-U
G-C,Watson-Crick
3' 5'HCV IRES IIIe 191 GU wobble
5' 3'
A-G,sheared
G-U
U-A,Watson-Crick
3' 5'Group II sp intron 192 GU wobble
5' 3'
A-U, Watson-Crick
G-U
G-U, wobble
3' 5'Group I Intron 193 GU wobble
5' 3'
A-U, Watson-Crick
U-G
G A,*
3' 5'Group I Intron 194 GU wobble
5' 3'
A-U,*
G-U
G-C,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 195 GU wobble
5' 3'
A-U,amino-4-carbonyl
G-U
G C,*
3' 5'Atomic structure of the large ribosomal subunit 196 GU wobble
5' 3'
A-U,amino-4-carbonyl
G-U
G-C,Waston-Crick
3' 5'Atomic structure of the large ribosomal subunit 197 GU wobble
5' 3'
A-U,Watson-Crick
G-A
G-A,imino
3' 5'Structure of the 30S ribosomal subunit 198 GU wobble
5' 3'
A-U,Watson-Crick
G-U
A-U,Watson-Crick
3' 5'Influenza virus panhandle RNA 199 GU wobble
5' 3'
A-U,Watson-Crick
G-U
C-G,Watson-Crick
3' 5'Group II sp intron 200 GU wobble
5' 3'
A-U,Watson-Crick
G-U
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit GU wobble
5' 3'
A-U,Watson-Crick
G-U
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit more info... GU wobble
5' 3'
A-U,Watson-Crick
G-U
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit more info... 201 GU wobble
5' 3'
A-U,Watson-Crick
G-U
G-C,Watson-Crick
3' 5'U4-U6 snRNA-stem II 202 GU wobble
5' 3'
A-U,Watson-Crick
G-U
G-C,Watson-Crick
3' 5'P5abc sub-domain of group I intron 203 GU wobble
5' 3'
A-U,Watson-Crick
G-U
G-C,Watson-Crick
3' 5'tRNA (Ile) 204 GU wobble
5' 3'
A-U,Watson-Crick
G-U
G-G,amino-N7
3' 5'Structure of the 30S ribosomal subunit 205 GU wobble
5' 3'
A-U,Watson-Crick
G-U
G-U,Wobble
3' 5'Metal binding site in P5 stem of group I Intron 206 GU wobble
5' 3'
A-U,Watson-Crick
G-U
G-U,wobble
3' 5'Group I Intron 207 GU wobble
5' 3'
A-U,Watson-Crick
G-U
U-G,Wobble
3' 5'(GGAGUUCC)2 duplex 208 GU wobble
5' 3'
A-U,Watson-Crick
U-G
A A,*
3' 5'Group I Intron 209 GU wobble
5' 3'
A-U,Watson-Crick
U-G
C-G,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 210 GU wobble
5' 3'
C A,*
G-U
C-G,Watson-Crick
3' 5'U2 small nuclear RNA 211 GU wobble
5' 3'
C A,*
G-U
U-A,Watson-Crick
3' 5'Specificity domain of RNAse P 212 GU wobble
5' 3'
C C,*
G-U
C G,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 213 GU wobble
5' 3'
C C,*
G-U
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 214 GU wobble
5' 3'
C G *
G-U
G-C,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 215 GU wobble
5' 3'
C G,*
G-U
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 216 GU wobble
5' 3'
C G,*
G-U
C-G,Watson-Crick
3' 5'Group II sp intron 217 GU wobble
5' 3'
C G,*
G-U
G-C,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 218 GU wobble
5' 3'
C G,*
G-U
U U,*
3' 5'Atomic structure of the large ribosomal subunit 219 GU wobble
5' 3'
C U,*
G-U
G-C,Watson-Crick
3' 5'HIV-1 rev-RNA complex 220 GU wobble
5' 3'
C-A,carbonyl-amino
G-U
G-C,Watson-Crick
3' 5'T4 RNA hairpin of bacteriophage 221 GU wobble
5' 3'
C-A,Wobble
U-G
G-C,Watson-Crick
3' 5'RNA helix recognized by zinc-finger protein 222 GU wobble
5' 3'
C-C,amino-carbonyl
G-U
A-U,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 223 GU wobble
5' 3'
C-C,amino-carbonyl
G-U
G-U,Wobble
3' 5'TAR-RNA element of equine infectious anemia virus 224 GU wobble
5' 3'
C-G, Watson-Crick
G-U
C-G Watson-Crick
3' 5'V. Vulnificus A-riboswitch adenine complex 225 GU wobble
5' 3'
C-G,Watson-Crick,*
G-U
C-G,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 226 GU wobble
5' 3'
C-G,Watson-Crick,*
G-U
G-C,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 227 GU wobble
5' 3'
C-G,Watson-Crick
G-U
A A,*
3' 5'SRP19 228 GU wobble
5' 3'
C-G,Watson-Crick
G-U
A-C,amino-carbonyl(1 bond)
3' 5'dodecamer 229 GU wobble
5' 3'
C-G,Watson-Crick
G-U
A-U,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit GU wobble
5' 3'
C-G,Watson-Crick
G-U
A-U,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit more info... GU wobble
5' 3'
C-G,Watson-Crick
G-U
A-U,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit more info... GU wobble
5' 3'
C-G,Watson-Crick
G-U
A-U,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit more info... GU wobble
5' 3'
C-G,Watson-Crick
G-U
A-U,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit more info... GU wobble
5' 3'
C-G,Watson-Crick
G-U
A-U,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit more info... 230 GU wobble
5' 3'
C-G,Watson-Crick
G-U
A-U,Watson-Crick
3' 5'Hammerhead ribozyme 231 GU wobble
5' 3'
C-G,Watson-Crick
G-U
C-G,Watson-Crick
3' 5'IRE RNA 232 GU wobble
5' 3'
C-G,Watson-Crick
G-U
C-G,Watson-Crick
3' 5'HCV IRES IIId 233 GU wobble
5' 3'
C-G,Watson-Crick
G-U
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 234 GU wobble
5' 3'
C-G,Watson-Crick
G-U
C-G,Watson-Crick
3' 5'RNA duplex [r(CGUGAUCG)dC]2 235 GU wobble
5' 3'
C-G,Watson-Crick
G-U
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 236 GU wobble
5' 3'
C-G,Watson-Crick
G-U
C-G,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit GU wobble
5' 3'
C-G,Watson-Crick
G-U
C-G,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit more info... 237 GU wobble
5' 3'
C-G,Watson-Crick
G-U
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit GU wobble
5' 3'
C-G,Watson-Crick
G-U
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit more info... 238 GU wobble
5' 3'
C-G,Watson-Crick
G-U
C-G,Watson-Crick
3' 5'L30-mRNA complex 239 GU wobble
5' 3'
C-G,Watson-Crick
G-U
C-G,Watson-Crick
3' 5'RNA duplex [r(CGUGAUCG)dC]2 240 GU wobble
5' 3'
C-G,Watson-Crick
G-U
G A,*
3' 5'L30-mRNA complex 241 GU wobble
5' 3'
C-G,Watson-Crick
G-U
G U,*
3' 5'Structure of the 30S ribosomal subunit 242 GU wobble
5' 3'
C-G,Watson-Crick
G-U
G-C,N3-amino,amino-N3
3' 5'Peptidyl transferase centre 243 GU wobble
5' 3'
C-G,Watson-Crick
G-U
G-C,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 244 GU wobble
5' 3'
C-G,Watson-Crick
G-U
G-C,Watson-Crick
3' 5'5S rRNA helix I 245 GU wobble
5' 3'
C-G,Watson-Crick
G-U
G-C,Watson-Crick
3' 5'Specificity domain of RNAse P 246 GU wobble
5' 3'
C-G,Watson-Crick
G-U
G-C,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 247 GU wobble
5' 3'
C-G,Watson-Crick
G-U
G-C,Watson-Crick
3' 5'Dienococcus Radiodurans 23S RNA 248 GU wobble
5' 3'
C-G,Watson-Crick
G-U
G-C,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 249 GU wobble
5' 3'
C-G,Watson-Crick
G-U
G-G,amino-N7
3' 5'SRP19 250 GU wobble
5' 3'
C-G,Watson-Crick
G-U
G-U,Wobble
3' 5'14 base pair RNA duplex 251 GU wobble
5' 3'
C-G,Watson-Crick
G-U
U-A,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 252 GU wobble
5' 3'
C-G,Watson-Crick
G-U
U-G,Wobble
3' 5'SL4 RNA 253 GU wobble
5' 3'
C-G,Watson-Crick
G-U
U-U,imino-carbonyl
3' 5'Mismatches in RNA 254 GU wobble
5' 3'
C-G,Watson-Crick
U-G
A-A,amino-N7,N1-amino
3' 5'Structure of the 30S ribosomal subunit 255 GU wobble
5' 3'
C-G,Watson-Crick
U-G
G U,*
3' 5'Structure of the 30S ribosomal subunit 256 GU wobble
5' 3'
C-G,Watson-Crick
U-G
G-C,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 257 GU wobble
5' 3'
C-G,Watson-Crick
U-G
G-U,wobble
3' 5'Group I Intron 258 GU wobble
5' 3'
C-G,Watson-Crick
U-G
G-U,wobble
3' 5'Atomic structure of the large ribosomal subunit (5S) 259 GU wobble
5' 3'
C-U,4-carbonyl-amino (1 bond)
G-U
C-G,Watson-Crick
3' 5'A brominated 15-nucleotide RNA helix 260 GU wobble
5' 3'
C-U,amino-4-carbonyl
G-U
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit GU wobble
5' 3'
C-U,amino-4-carbonyl
G-U
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit more info... 261 GU wobble
5' 3'
C-U,amino-4-carbonyl
G-U
G-C,Watson-Crick
3' 5'C-UUCG-G..C-UUCG-G 262 GU wobble
5' 3'
C-U,Watson-Crick
G-U
G-C,Watson-Crick
3' 5'(GCUUCGGC)dU 263 GU wobble
5' 3'
G A,*
G-U
C-G,Watson-Crick
3' 5'P5abc sub-domain of group I intron 264 GU wobble
5' 3'
G A,*
G-U
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 265 GU wobble
5' 3'
G A,*
G-U
C-G,Watson-Crick
3' 5'Mismatches in RNA 266 GU wobble
5' 3'
G A,*
G-U
G-C,Watson-Crick
3' 5'Dienococcus Radiodurans 23S RNA 267 GU wobble
5' 3'
G A,*
G-U
G-C,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 268 GU wobble
5' 3'
G G,*
G-U
A-U,Watson-Crick
3' 5'Dienococcus Radiodurans 23S RNA 269 GU wobble
5' 3'
G G,*
G-U
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 270 GU wobble
5' 3'
G G,*
G-U
C-G,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 271 GU wobble
5' 3'
G G,*
G-U
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 272 GU wobble
5' 3'
G G,*
G-U
C-G,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 273 GU wobble
5' 3'
G U,*
G-U
C-G,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 274 GU wobble
5' 3'
G U,*
G-U
G-C,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 275 GU wobble
5' 3'
G U,*
G-U
G-C,Watson-Crick
3' 5'Group II intron branch site 276 GU wobble
5' 3'
G-A,sheared
G-U
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 277 GU wobble
5' 3'
G-C, Watson-Crick
G-U
A-A, amino-N3
3' 5'Group I Intron 278 GU wobble
5' 3'
G-C, Watson-Crick
G-U
C-G, Watson-Crick
3' 5'Bacillus subtilis xpt G-Riboswitch G complex 279 GU wobble
5' 3'
G-C, Watson-Crick
G-U
C-G, Watson-Crick
3' 5'Natural guanine responsive riboswitch complexed with hypoxanthine 280 GU wobble
5' 3'
G-C, Watson-Crick
G-U
U-G, Wobble
3' 5'Group I Intron 281 GU wobble
5' 3'
G-C,Watson-Crick,*
G-U
G-C,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 282 GU wobble
5' 3'
G-C,Watson-Crick
G-U
A-G,carbonyl-amino
3' 5'57nt 16S ribosomal RNA 283 GU wobble
5' 3'
G-C,Watson-Crick
G-U
A-G,imino
3' 5'Structure of the 30S ribosomal subunit 284 GU wobble
5' 3'
G-C,Watson-Crick
G-U
A-G,sheared
3' 5'Structure of the 30S ribosomal subunit 285 GU wobble
5' 3'
G-C,Watson-Crick
G-U
A-U,Watson-Crick
3' 5'Yeast tRNA (Phe) GU wobble
5' 3'
G-C,Watson-Crick
G-U
A-U,Watson-Crick
3' 5'Yeast tRNA (Phe) more info... 286 GU wobble
5' 3'
G-C,Watson-Crick
G-U
A-U,Watson-Crick
3' 5'IRE RNA 287 GU wobble
5' 3'
G-C,Watson-Crick
G-U
C-G,Watson-Crick
3' 5'HCV IRES IIIe 288 GU wobble
5' 3'
G-C,Watson-Crick
G-U
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 289 GU wobble
5' 3'
G-C,Watson-Crick
G-U
C-G,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 290 GU wobble
5' 3'
G-C,Watson-Crick
G-U
C-G,Watson-Crick
3' 5'RNASE P 291 GU wobble
5' 3'
G-C,Watson-Crick
G-U
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 292 GU wobble
5' 3'
G-C,Watson-Crick
G-U
C-G,Watson-Crick
3' 5'Dienococcus Radiodurans 23S RNA 293 GU wobble
5' 3'
G-C,Watson-Crick
G-U
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 294 GU wobble
5' 3'
G-C,Watson-Crick
G-U
C-G,Watson-Crick
3' 5'HIV1 - LAI 295 GU wobble
5' 3'
G-C,Watson-Crick
G-U
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 296 GU wobble
5' 3'
G-C,Watson-Crick
G-U
G-C, Watson Crick
3' 5'57nt 16S ribosomal RNA 297 GU wobble
5' 3'
G-C,Watson-Crick
G-U
G-C,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 298 GU wobble
5' 3'
G-C,Watson-Crick
G-U
G-C,Watson-Crick
3' 5'Helix 6 of human SRP 299 GU wobble
5' 3'
G-C,Watson-Crick
G-U
G-C,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 300 GU wobble
5' 3'
G-C,Watson-Crick
G-U
G-C,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 301 GU wobble
5' 3'
G-C,Watson-Crick
G-U
G-C,Watson-Crick
3' 5'Acceptor stem of tRNA (Ala) 302 GU wobble
5' 3'
G-C,Watson-Crick
G-U
G-C,Watson-Crick
3' 5'Acceptor helix model of tRNA (Ala) 303 GU wobble
5' 3'
G-C,Watson-Crick
G-U
G-C,Watson-Crick
3' 5'tRNA (Ala) acceptor stem RNA fragment 304 GU wobble
5' 3'
G-C,Watson-Crick
G-U
G-C,Watson-Crick
3' 5'SRP 19 splicing domain 305 GU wobble
5' 3'
G-C,Watson-Crick
G-U
G-C,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 306 GU wobble
5' 3'
G-C,Watson-Crick
G-U
G-C,Watson-Crick
3' 5'T.Thermophilus tRNA (Ser) complexed with seryl-tRNA synthetase 307 GU wobble
5' 3'
G-C,Watson-Crick
G-U
G-C,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 308 GU wobble
5' 3'
G-C,Watson-Crick
G-U
G-C,Watson-Crick
3' 5'(GGGCGCUCC)2 duplex 309 GU wobble
5' 3'
G-C,Watson-Crick
G-U
G-C,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 310 GU wobble
5' 3'
G-C,Watson-Crick
G-U
G-C,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 311 GU wobble
5' 3'
G-C,Watson-Crick
G-U
G-C,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit GU wobble
5' 3'
G-C,Watson-Crick
G-U
G-C,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit more info... 312 GU wobble
5' 3'
G-C,Watson-Crick
G-U
G-U,Wobble
3' 5'Dienococcus Radiodurans 23S RNA 313 GU wobble
5' 3'
G-C,Watson-Crick
G-U
G-U,Wobble
3' 5'Atomic structure of the large ribosomal subunit 314 GU wobble
5' 3'
G-C,Watson-Crick
G-U
U-A,4-carbonyl-amino
3' 5'Atomic structure of the large ribosomal subunit 315 GU wobble
5' 3'
G-C,Watson-Crick
G-U
U-A,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 316 GU wobble
5' 3'
G-C,Watson-Crick
G-U
U-G,Wobble
3' 5'P5-hairpin of Group I Intron Ribozyme 317 GU wobble
5' 3'
G-C,Watson-Crick
G-U
U-G,Wobble
3' 5'SL4 RNA 318 GU wobble
5' 3'
G-C,Watson-Crick
G-U
U-G,wobble
3' 5'Group I Intron GU wobble
5' 3'
G-C,Watson-Crick
G-U
U-G,wobble
3' 5'Group I Intron more info... 319 GU wobble
5' 3'
G-C,Watson-Crick
G-U
U-G,Wobble
3' 5'P5-hairpin of Group I Intron Ribozyme 320 GU wobble
5' 3'
G-C,Watson-Crick
G-U
U-U,imino-carbonyl
3' 5'Mismatches in RNA 321 GU wobble
5' 3'
G-C,Watson-Crick
U-G
A-U,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 322 GU wobble
5' 3'
G-C,Watson-Crick
U-G
C-G,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 323 GU wobble
5' 3'
G-C,Watson-Crick
U-G
G-A,sheared
3' 5'Structure of the 30S ribosomal subunit 324 GU wobble
5' 3'
G-G,N7-imino
G-U
G-C,Watson-Crick
3' 5'16S rRNA of T.thermophilus, Helix22 325 GU wobble
5' 3'
G-U, bifurcated
G-U
U-A,Watson-Crick
3' 5'Stem-loop D RNA of 5'-UTR of enteroviruses and rhinoviruses 326 GU wobble
5' 3'
G-U,Wobble
G-U
* *,*
3' 5'P4-P6 intron RNA 327 GU wobble
5' 3'
G-U,Wobble
G-U
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 328 GU wobble
5' 3'
G-U,wobble
G-U
G-C, Watson-Crick
3' 5'Group I Intron 329 GU wobble
5' 3'
G-U,wobble
G-U
G-C,Watson-Crick
3' 5'Group I Intron 330 GU wobble
5' 3'
G-U,Wobble
G-U
G-C,Watson-Crick
3' 5'Metal binding site in P5 stem of group I intron 331 GU wobble
5' 3'
G-U,Wobble
G-U
G-U,imino:amino-4-carbonyl
3' 5'Saccharide-RNA complex 332 GU wobble
5' 3'
G-U,Wobble
G-U
G-U,Wobble
3' 5'Dienococcus Radiodurans 23S RNA 333 GU wobble
5' 3'
G-U,Wobble
G-U
U-A,Wobble
3' 5'14 base pair RNA duplex 334 GU wobble
5' 3'
U A,*
G-U
A U,*
3' 5'Structure of the 30S ribosomal subunit 335 GU wobble
5' 3'
U A,*
G-U
C-G,Watson-Crick
3' 5'Ribosomal protein S8 binding site 336 GU wobble
5' 3'
U A,*
G-U
U-A,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 337 GU wobble
5' 3'
U C,*
G-U
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit GU wobble
5' 3'
U C,*
G-U
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit more info... GU wobble
5' 3'
U C,*
G-U
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit more info... 338 GU wobble
5' 3'
U G,*
G-U
G-C,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 339 GU wobble
5' 3'
U U,*
G-U
A-U,Watson-Crick
3' 5'RNA hairpin loop 340 GU wobble
5' 3'
U U,*
G-U
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 341 GU wobble
5' 3'
U U,*
G-U
G-C,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 342 GU wobble
5' 3'
U-A, Watson-Crick
G-U
G-C, Watson-Crick
3' 5'Natural guanine responsive riboswitch complexed with hypoxanthine 343 GU wobble
5' 3'
U-A, Watson-Crick
G-U
G-C, Watson-Crick
3' 5'Bacillus subtilis xpt G-Riboswitch G complex 344 GU wobble
5' 3'
U-A,*
G-U
U-A,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 345 GU wobble
5' 3'
U-A,Watson-Crick
G-U
A-U,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 346 GU wobble
5' 3'
U-A,Watson-Crick
G-U
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 347 GU wobble
5' 3'
U-A,Watson-Crick
G-U
C-G,Watson-Crick
3' 5'S8/RNA complex 348 GU wobble
5' 3'
U-A,Watson-Crick
G-U
C-G,Watson-Crick
3' 5'Dimer initiation complex of HIV-1 genomic RNA 349 GU wobble
5' 3'
U-A,Watson-Crick
G-U
G-C,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 350 GU wobble
5' 3'
U-A,Watson-Crick
G-U
G-C,Watson-Crick
3' 5'T4 RNA hairpin loop mutant 351 GU wobble
5' 3'
U-A,Watson-Crick
G-U
G-U,Wobble
3' 5'Saccharide-RNA complex 352 GU wobble
5' 3'
U-A,Watson-Crick
G-U
U-A,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 353 GU wobble
5' 3'
U-A,Watson-Crick
G-U
U-A,Watson-Crick
3' 5'Group I self splicing intron fragment 354 GU wobble
5' 3'
U-A,Watson-Crick
G-U
U-A,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 355 GU wobble
5' 3'
U-A,Watson-Crick
G-U
U-A,Watson-Crick
3' 5'P1 helix from group I intron 356 GU wobble
5' 3'
U-A,Watson-Crick
G-U
U-A,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 357 GU wobble
5' 3'
U-A,Watson-Crick
G-U
U-G,Wobble
3' 5'(GUGUGUA)dC 358 GU wobble
5' 3'
U-G, wobble
G-U
G-C, Watson-Crick
3' 5'Group I Intron 359 GU wobble
5' 3'
U-G,carbonyl-amino
G-U
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 360 GU wobble
5' 3'
U-G,carbonyl-imino
G-U
A-U,Watson-Crick
3' 5'Tobramycin-RNA aptamer 361 GU wobble
5' 3'
U-G,wobble
G-U
A-U,Watson-Crick
3' 5'Hook turn 362 GU wobble
5' 3'
U-G,Wobble
G-U
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 363 GU wobble
5' 3'
U-G,wobble
G-U
C-G,Watson-Crick
3' 5'Hook turn 364 GU wobble
5' 3'
U-G,Wobble
G-U
C-G,Watson-Crick
3' 5'5S rRNA loop E 365 GU wobble
5' 3'
U-G,Wobble
G-U
G-C,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 366 GU wobble
5' 3'
U-G,Wobble
G-U
G-C,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 367 GU wobble
5' 3'
U-G,wobble
G-U
G-C,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit (5S) 368 GU wobble
5' 3'
U-G,Wobble
G-U
G-C,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 369 GU wobble
5' 3'
U-G,Wobble
G-U
G-C,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit GU wobble
5' 3'
U-G,Wobble
G-U
G-C,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit more info... 370 GU wobble
5' 3'
U-G,Wobble
G-U
G-C,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 371 GU wobble
5' 3'
U-G,Wobble
G-U
U-A,Watson-Crick
3' 5'5S rRNA loop E 372 GU wobble
5' 3'
U-G,Wobble
G-U
U-A,Watson-Crick
3' 5'(GUAUGUA)dC 373 GU wobble
5' 3'
U-G,Wobble
G-U
U-A,Watson-Crick
3' 5'(GGAUGUCC)2 duplex 374 GU wobble
5' 3'
U-U,imino-carbonyl
G-U
C-G,Watson-Crick
3' 5'Mismatches in RNA 375 GU wobble
5' 3'
U-U,imino-carbonyl
G-U
G-C,Watson-Crick
3' 5'Mismatches in RNA 376 GU wobble
5' 3'
U-U,imino-carbonyl
G-U
G-C,Watson-Crick
3' 5'(GGACUUUGGUCC)2-duplex 377 AA N7-amino
5' 3'
A C,*
A-A
G-C,Watson-Crick
3' 5'A site of 16S rRNA complexed with aminoglycoside 378 AA N7-amino
5' 3'
A-C,reverse Hoogsteen
A-A
U A,*
3' 5'Atomic structure of the large ribosomal subunit 379 AA N7-amino
5' 3'
A-C,reverse Hoogsteen
A-A
U G,*
3' 5'Structure of the 30S ribosomal subunit 380 AA N7-amino
5' 3'
A-U,Hoogsteen
A-A
C-C,carbonyl-amino(1 bond)
3' 5'Atomic structure of the large ribosomal subunit 381 AA N7-amino
5' 3'
A-U,N7-imino
A-A
A C,*
3' 5'Structure of the 30S ribosomal subunit 382 AA N7-amino
5' 3'
C C,*
A-A
U A,*
3' 5'Structure of the 30S ribosomal subunit 383 AA N7-amino
5' 3'
C-C,amino-carbonyl (1 bond)
A-A
U-A,reverse Hoogsteen
3' 5'Atomic structure of the large ribosomal subunit 384 AA N7-amino
5' 3'
G A,*
A-A
A A,*
3' 5'Structure of the 30S ribosomal subunit 385 AA N7-amino
5' 3'
G G,*
A-A
A G,*
3' 5'Atomic structure of the large ribosomal subunit 386 AA N7-amino
5' 3'
G U,*
A-A
A A,*
3' 5'Atomic structure of the large ribosomal subunit 387 AA N7-amino
5' 3'
G-A,imino
A-A
A-A,amino-N7
3' 5'(GGCCGAAAGGCC)2-duplex 388 AA N7-amino
5' 3'
G-C,Watson-Crick
A-A
Y G,*
3' 5'Yeast tRNA (fmet) 389 AA N7-amino
5' 3'
U-A, reverse Hoogsteen
A-A
U U,*
3' 5'Bacillus subtilis xpt G-Riboswitch G complex 390 AA N7-amino
5' 3'
U-A, reverse Hoogsteen
A-A
U U,*
3' 5'Natural guanine responsive riboswitch complexed with hypoxanthine 391 AA sheared
5' 3'
A C,*
A-A
C-G,Watson-Crick
3' 5'Dienococcus Radiodurans 23S RNA 392 AA sheared
5' 3'
A-U,Watson-Crick
A-A
A U,*
3' 5'Dienococcus Radiodurans 23S RNA 393 AA sheared
5' 3'
A-U,Watson-Crick
A-A
3' 5'Specificity domain of RNAse P 394 AA sheared
5' 3'
G-C,Watson-Crick
A-A
A A,*
3' 5'Dienococcus Radiodurans 23S RNA 395 CC 2-carbonyl-amino(H1); N3-amino(H2)
5' 3'
G-U,Wobble
C-C
G U,*
3' 5'TAR-RNA fragment of anemia virus 396 CC 2-carbonyl-amino(H1); N3-amino(H2)
5' 3'
U G,*
C-C
G G,*
3' 5'Atomic structure of the large ribosomal subunit (5S) 397 CC N3(+)-carbonyl, amino-N3
5' 3'
C-C,N3(+)-carbonyl,amino-N3
C-C
G-C,Watson-Crick
3' 5'RNA internal loop 398 GA imino
5' 3'
A C,*
G-A
A A,*
3' 5'Dienococcus Radiodurans 23S RNA 399 GA imino
5' 3'
A C,*
G-A
A A,*
3' 5'Atomic structure of the large ribosomal subunit 400 GA imino
5' 3'
A C,*
G-A
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 401 GA imino
5' 3'
A C,*
G-A
G-C,Watson-Crick
3' 5'Dimerization initiation site of genomic HIV-1 RNA 402 GA imino
5' 3'
A U,*
G-A
C-A, Reverse Hoogsteen
3' 5'Group I Intron 403 GA imino
5' 3'
A U,*
G-A
C-A,wobble
3' 5'Group I Intron 404 GA imino
5' 3'
A U,*
G-A
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 405 GA imino
5' 3'
A U,*
G-A
G-C,Watson-Crick
3' 5'HIV-1 DIS RNA 406 GA imino
5' 3'
A-A,N1-amino
G-A
C-G,Watson-Crick
3' 5'tRNA (Thr) 407 GA imino
5' 3'
A-A,N1-amino
G-A
G-U,wobble
3' 5'Structure of the 30S ribosomal subunit 408 GA imino
5' 3'
A-G,imino
G-A
C-G,Watson-Crick
3' 5'Mismatches in RNA 409 GA imino
5' 3'
A-U, Watson-Crick
G-A
U U,*
3' 5'apoB-mRNA stem-loop 410 GA imino
5' 3'
C A,*
G-A
G-C, Watson-Crick
3' 5'Diels-Alder ribozyme 411 GA imino
5' 3'
C G,*
G-A
C-G,Watson-Crick
3' 5'Yeast tRNA (Phe) 412 GA imino
5' 3'
C G,*
G-A
C-G,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 413 GA imino
5' 3'
C G,*
G-A
C-G,Watson-Crick
3' 5'tRNA (Val) 414 GA imino
5' 3'
C G,*
G-A
C-G,Watson-Crick
3' 5'tRNA (Ile) 415 GA imino
5' 3'
C G,*
G-A
U-A,Watson-Crick
3' 5'Methionyl-tRNAFMET formyltransferase 416 GA imino
5' 3'
C U,*
G-A
C-G,Watson-Crick
3' 5'Dienococcus Radiodurans 23S RNA 417 GA imino
5' 3'
C-G, Waston-Crick
G-A
A C,*
3' 5'Group I Intron 418 GA imino
5' 3'
C-G,Watson-Crick
A-G
U-G,Wobble
3' 5'Structure of the 30S ribosomal subunit 419 GA imino
5' 3'
C-G,Watson-Crick
G-A
G G,*
3' 5'Structure of the 30S ribosomal subunit 420 GA imino
5' 3'
G A,*
G-A
A A,*
3' 5'Dienococcus Radiodurans 23S RNA 421 GA imino
5' 3'
G C,*
G-A
A-U,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 422 GA imino
5' 3'
G C,*
G-A
G-C,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 423 GA imino
5' 3'
G G,*
G-A
G-C,Watson-Crick
3' 5'Nickel binding RNA motif 424 GA imino
5' 3'
G G,*
G-A
U C,*
3' 5'Yeast tRNA (Asp) 425 GA imino
5' 3'
G G,*
G-A
U-A,Watson-Crick
3' 5'Conserved internal loop of SRP RNA 426 GA imino
5' 3'
G G,*
G-A
U-G,wobble
3' 5'57nt 16S ribosomal RNA 427 GA imino
5' 3'
G-A,Imino
G-A
C-G,Watson-Crick
3' 5'P5GA, 22-nucleotide RNA hairpin 428 GA imino
5' 3'
G-A,imino
G-A
C-G,Watson-Crick
3' 5'Mismatches in RNA 429 GA imino
5' 3'
G-C, Watson-Crick
A-G
C A,*
3' 5'Group I Intron 430 GA imino
5' 3'
G-C, Watson-Crick
G-A
G *,*
3' 5'Group I Intron 431 GA imino
5' 3'
G-C,Watson-Crcik
G-A
A-A,amino-N1
3' 5'Structure of the 30S ribosomal subunit 432 GA imino
5' 3'
G-C,Watson-Crick
A-G
U U,*
3' 5'Structure of the 30S ribosomal subunit 433 GA imino
5' 3'
G-C,Watson-Crick
A-M2G
G C,*
3' 5'Yeast Phenylalanine tRNA 434 GA imino
5' 3'
G-C,Watson-Crick
G-A
A A,*
3' 5'HIV-1 rev-RNA complex 435 GA imino
5' 3'
G-C,Watson-Crick
G-A
A C,*
3' 5'F5 RNA aptamer complexed with protein target 436 GA imino
5' 3'
G-C,Watson-Crick
G-A
A C,*
3' 5'L11 binding fragment on large ribosome subunit 437 GA imino
5' 3'
G-C,Watson-Crick
G-A
A-G,imino
3' 5'(GCGGACGC)2-duplex GA imino
5' 3'
G-C,Watson-Crick
G-A
A-G,imino
3' 5'(GCGGACGC)2-duplex more info... GA imino
5' 3'
G-C,Watson-Crick
G-A
A-G,imino
3' 5'(GCGGACGC)2-duplex more info... 438 GA imino
5' 3'
G-C,Watson-Crick
G-A
C A,*
3' 5'Hepatitis delta virus ribozyme 439 GA imino
5' 3'
G-C,Watson-Crick
G-A
C A,*
3' 5'genomic HDV ribozyme 440 GA imino
5' 3'
G-C,Watson-Crick
G-A
C C,*
3' 5'Structure of the 30S ribosomal subunit 441 GA imino
5' 3'
G-C,Watson-Crick
G-A
C U,*
3' 5'tRNA (tyr) 442 GA imino
5' 3'
G-C,Watson-Crick
G-A
G C,*
3' 5'Prolyl-tRNA Synthetase form Thermus Thermophilus 443 GA imino
5' 3'
G-C,Watson-Crick
G-A
G U,*
3' 5'"Rev Binding Element (RBE), RNA double helices of TypeI duplexes (duplex 1 and 3)" 444 GA imino
5' 3'
G-C,Watson-Crick
G-A
G U,*
3' 5'HIV-1 rev-RNA complex 445 GA imino
5' 3'
G-C,Watson-Crick
G-A
G-G,N1-carbonyl
3' 5'Rev peptide binding RRE RNA 446 GA imino
5' 3'
G-C,Watson-Crick
G-A
G-U,amino-2-carbonyl(1 bond)
3' 5'Atomic structure of the large ribosomal subunit 447 GA imino
5' 3'
G-C,Watson-Crick
G-A
U A,*
3' 5'Atomic structure of the large ribosomal subunit 448 GA imino
5' 3'
G-G,amino-carbonyl
G-A
A-U,Watson-Crick
3' 5'FMN-binding RNA aptamer 449 GA imino
5' 3'
G-G,carbonyl-amino (1 bond)
G-A
U-A,Watson-Crick
3' 5'4.5S RNA, domain IV, loopA 450 GA imino
5' 3'
G-G,carbonyl-amino(1 bond)
G-A
U-A,Watson-Crick
3' 5'dodecamer 451 GA imino
5' 3'
G-G,carbonyl-amino
G-A
C-G,Watson-Crick
3' 5'SRP19 452 GA imino
5' 3'
G-G,Carbonyl-amino
G-A
U-A,Watson-Crick
3' 5'Ribonucleoprotein core of the SRP 453 GA imino
5' 3'
G-G,carbonyl-imino
G-A
U-G,Wobble
3' 5'16S rRNA of T. thermophilus, Tth T4 RNA, helix 22 454 GA imino
5' 3'
G-G,Hoogsteen,asymmetric
G-A
G-C,Watson-Crick
3' 5'RRE(Rev response element) of HIVI 455 GA imino
5' 3'
G-G,imino-carbonyl
G-A
U-G,wobble
3' 5'Structure of the 30S ribosomal subunit 456 GA imino
5' 3'
G-G,N7-imino
G-A
U-G,Wobble
3' 5'16S rRNA of T.thermophilus, Helix22 457 GA imino
5' 3'
G-U,carbonyl-imino
G-A
U-A,Watson-Crick
3' 5'Tobramycin-RNA aptamer 458 GA imino
5' 3'
U C,*
G-A
C-G,Watson-Crick
3' 5'HCV IRES eIF3 binding site 459 GA imino
5' 3'
U C,*
G-A
C-G,Watson-Crick
3' 5'Dienococcus Radiodurans 23S RNA 460 GA imino
5' 3'
U U,*
G-A
A-U,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 461 GA imino
5' 3'
U-A,Watson-Crick
G-A
A-G,Imino
3' 5'Hammerhead ribozyme fragment 462 GA imino
5' 3'
U-G,4-carbonyl-imino:amino
G-A
G-G,carbonyl-imino:amino
3' 5'5S rRNA loop E 463 GA imino
5' 3'
U-G,Wobble
G-A
G-A,Imino
3' 5'P5GA, 22-nucleotide RNA hairpin 464 GA imino
5' 3'
U-U,imino-carbonyl
G-A
C-G,Watson-Crick
3' 5'Mismatches in RNA 465 GA sheared
5' 3'
A A,*
A-G
G-C,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 466 GA sheared
5' 3'
A A,*
G-A
G-C,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 467 GA sheared
5' 3'
A A,*
G-U
A-U,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 468 GA sheared
5' 3'
A C,*
A-G
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 469 GA sheared
5' 3'
A G,*
G-A
A G,*
3' 5'Atomic structure of the large ribosomal subunit 470 GA sheared
5' 3'
A G,*
G-A
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 471 GA sheared
5' 3'
A-A,N3-amino(1 bond)
A-G
G-C,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 472 GA sheared
5' 3'
A-C,Amino-carbonyl
G-U
C-G,Watson-Crick
3' 5'Ribonucleoprotein of the SRP 473 GA sheared
5' 3'
A-C,N1-amino
G-A
A-U,Reverse Hoogsteen
3' 5'Loop B of hairpin ribozyme 474 GA sheared
5' 3'
A-C,N1-amino
G-A
G-U,amino-4-carbonyl
3' 5'Atomic structure of the large ribosomal subunit 475 GA sheared
5' 3'
A-G, sheared
A-G
C C,*
3' 5'Group I Intron 476 GA sheared
5' 3'
A-U,Watson-Crick
G-A
A G,*
3' 5'GAGA tetraloop 477 GA sheared
5' 3'
A-U,Watson-Crick
G-A
A-A,N3-amino
3' 5'Atomic structure of the large ribosomal subunit 478 GA sheared
5' 3'
A-U,Watson-Crick
G-A
A-G,*
3' 5'Group 1 intron 479 GA sheared
5' 3'
A-U,Watson-Crick
G-A
A-U,Hoogsteen
3' 5'Atomic structure of the large ribosomal subunit 480 GA sheared
5' 3'
A-U,Watson-Crick
G-A
A-U,Reverse Hoogsteen
3' 5'FMN-binding RNA aptamer 481 GA sheared
5' 3'
A-U,Watson-Crick
G-A
C U,*
3' 5'Atomic structure of the large ribosomal subunit 482 GA sheared
5' 3'
A-U,Watson-Crick
G-A
C-G,Watson-Crick
3' 5'U4-U6 snRNA-stem II 483 GA sheared
5' 3'
A-U,Watson-Crick
G-A
U G,*
3' 5'HIV-1 rev-RNA complex 484 GA sheared
5' 3'
C A,*
A-G
G-C,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 485 GA sheared
5' 3'
C A,*
G-A
G A,*
3' 5'Dienococcus Radiodurans 23S RNA 486 GA sheared
5' 3'
C C,*
G-A
G-A,Sheared
3' 5'P5abc domain of the group I intron of T. thermophila 487 GA sheared
5' 3'
C G,*
A-G
G-C,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 488 GA sheared
5' 3'
C G,*
G-A
A C,*
3' 5'Structure of the 30S ribosomal subunit 489 GA sheared
5' 3'
C U,*
G-A
A G,*
3' 5'Dienococcus Radiodurans 23S RNA 490 GA sheared
5' 3'
C U,*
G-A
A-A,N7-amino(1 bond)
3' 5'Dienococcus Radiodurans 23S RNA 491 GA sheared
5' 3'
C U,*
G-A
C A,*
3' 5'Atomic structure of the large ribosomal subunit 492 GA sheared
5' 3'
C-A,carbonyl-amino
A-G
C-G,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 493 GA sheared
5' 3'
C-A,wobble
G-A
A-G,sheared
3' 5'VS ribozyme substarte RNA 494 GA sheared
5' 3'
C-A,wobble
G-A
A-G,sheared
3' 5'Secondary structure of VSm1 substrate hairpin analog 495 GA sheared
5' 3'
C-A,Wobble
G-A
U G,*
3' 5'Loop A hairpin ribozyme from tobacco ringspot virus 496 GA sheared
5' 3'
C-C,carbonyl-amino
G-A
A-U,Hoogsteen
3' 5'Atomic structure of the large ribosomal subunit 497 GA sheared
5' 3'
C-C,N3-amino
G-A
A U,*
3' 5'Atomic structure of the large ribosomal subunit 498 GA sheared
5' 3'
C-C,N3-amino
G-A
A-A,N7-amino;amino-N3
3' 5'Atomic structure of the large ribosomal subunit 499 GA sheared
5' 3'
C-G, Watson-Crick
A-G
A-C, *
3' 5'Group I Intron 500 GA sheared
5' 3'
C-G,Watosn-Crick
G-A
A-U,N7-imino,*
3' 5'Atomic structure of the large ribosomal subunit 501 GA sheared
5' 3'
C-G,Watson-Crcik
G-A
A-G,Sheared
3' 5'U4 snRNA fragment/15.5KD protein complex 502 GA sheared
5' 3'
C-G,Watson-Crick
G A
U A,*
3' 5'Atomic structure of the large ribosomal subunit 503 GA sheared
5' 3'
C-G,Watson-Crick
G-A
A A,*
3' 5'Dienococcus Radiodurans 23S RNA 504 GA sheared
5' 3'
C-G,Watson-Crick
G-A
A A,*
3' 5'Hammerhead ribozyme 505 GA sheared
5' 3'
C-G,Watson-Crick
G-A
A A,*
3' 5'Saccharide-RNA complex 506 GA sheared
5' 3'
C-G,Watson-Crick
G-A
A A,*
3' 5'Dienococcus Radiodurans 23S RNA GA sheared
5' 3'
C-G,Watson-Crick
G-A
A A,*
3' 5'Dienococcus Radiodurans 23S RNA more info... 507 GA sheared
5' 3'
C-G,Watson-Crick
G-A
A A,*
3' 5'Structure of the 30S ribosomal subunit 508 GA sheared
5' 3'
C-G,Watson-Crick
G-A
A A,*
3' 5'Secondary structure of VSm1 substrate hairpin analog 509 GA sheared
5' 3'
C-G,Watson-Crick
G-A
A A,*
3' 5'P5abc sub-domain of group I intron 510 GA sheared
5' 3'
C-G,Watson-Crick
G-A
A A,*
3' 5'GAAA tetraloop 511 GA sheared
5' 3'
C-G,Watson-Crick
G-A
A C,*
3' 5'Dienococcus Radiodurans 23S RNA 512 GA sheared
5' 3'
C-G,Watson-Crick
G-A
A G,*
3' 5'SRL of 28S rRNA; Tetraloop GA sheared
5' 3'
C-G,Watson-Crick
G-A
A G,*
3' 5'SRL of 28S rRNA; Tetraloop more info... GA sheared
5' 3'
C-G,Watson-Crick
G-A
A G,*
3' 5'SRL of 28S rRNA; Tetraloop more info... 513 GA sheared
5' 3'
C-G,Watson-Crick
G-A
A G,*
3' 5'SRL of 23S rRNA 514 GA sheared
5' 3'
C-G,Watson-Crick
G-A
A U,*
3' 5'L1 Protuberance 515 GA sheared
5' 3'
C-G,Watson-Crick
G-A
A U,*
3' 5'Atomic structure of the large ribosomal subunit 516 GA sheared
5' 3'
C-G,Watson-Crick
G-A
A U,*
3' 5'Dienococcus Radiodurans 23S RNA 517 GA sheared
5' 3'
C-G,Watson-Crick
G-A
A-A,amino-N3;N7-amino
3' 5'Atomic structure of the large ribosomal subunit 518 GA sheared
5' 3'
C-G,Watson-Crick
G-A
A-A,N3-amino
3' 5'Atomic structure of the large ribosomal subunit 519 GA sheared
5' 3'
C-G,Watson-Crick
G-A
A-A,N7 amino symmetric
3' 5'HCV IRES IIId 520 GA sheared
5' 3'
C-G,Watson-Crick
G-A
A-A,N7-amino,symmetric
3' 5'Atomic structure of the large ribosomal subunit 521 GA sheared
5' 3'
C-G,Watson-Crick
G-A
A-A,N7-amino;amino-N3
3' 5'Atomic structure of the large ribosomal subunit 522 GA sheared
5' 3'
C-G,Watson-Crick
G-A
A-A,N7-amino
3' 5'(GGCCGAAAGGCC)2-duplex 523 GA sheared
5' 3'
C-G,Watson-Crick
G-A
A-C,N7-amino
3' 5'Atomic structure of the large ribosomal subunit 524 GA sheared
5' 3'
C-G,Watson-Crick
G-A
A-G, Sheared
3' 5'Hammerhead ribozyme 525 GA sheared
5' 3'
C-G,Watson-Crick
G-A
A-G,sheared
3' 5'Atomic structure of the large ribosomal subunit 526 GA sheared
5' 3'
C-G,Watson-Crick
G-A
A-G,Sheared
3' 5'RNA duplex modelled after ribozymes 527 GA sheared
5' 3'
C-G,Watson-Crick
G-A
A-G,Sheared
3' 5'Hammerhead ribozyme 528 GA sheared
5' 3'
C-G,Watson-Crick
G-A
A-G,Sheared
3' 5'VS ribozyme substarte RNA 529 GA sheared
5' 3'
C-G,Watson-Crick
G-A
A-G,Sheared
3' 5'(GGCGAGCC)2-duplex 530 GA sheared
5' 3'
C-G,Watson-Crick
G-A
A-G,sheared
3' 5'Secondary structure of VSm1 substrate hairpin analog 531 GA sheared
5' 3'
C-G,Watson-Crick
G-A
A-G,Sheared
3' 5'(GGCGAGCC)2 532 GA sheared
5' 3'
C-G,Watson-Crick
G-A
A-U,amino-2-carbonyl
3' 5'Structure of the 30S ribosomal subunit 533 GA sheared
5' 3'
C-G,Watson-Crick
G-A
A-U,imino-N7 (1 bond)
3' 5'Hook turn 534 GA sheared
5' 3'
C-G,Watson-Crick
G-A
A-U,Reverse Hoogsteen
3' 5'5S rRNA loop E GA sheared
5' 3'
C-G,Watson-Crick
G-A
A-U,Reverse Hoogsteen
3' 5'5S rRNA loop E more info... GA sheared
5' 3'
C-G,Watson-Crick
G-A
A-U,Reverse Hoogsteen
3' 5'5S rRNA loop E more info... 535 GA sheared
5' 3'
C-G,Watson-Crick
G-A
A-U,reverse Hoogsteen
3' 5'HCV IRES IIId 536 GA sheared
5' 3'
C-G,Watson-Crick
G-A
A-U,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 537 GA sheared
5' 3'
C-G,Watson-Crick
G-A
C A, *
3' 5'L30-mRNA complex 538 GA sheared
5' 3'
C-G,Watson-Crick
G-A
C A,*
3' 5'GCAA tetraloop 539 GA sheared
5' 3'
C-G,Watson-Crick
G-A
C A,*
3' 5'Dienococcus Radiodurans 23S RNA 540 GA sheared
5' 3'
C-G,Watson-Crick
G-A
C G,*
3' 5'Dienococcus Radiodurans 23S RNA 541 GA sheared
5' 3'
C-G,Watson-Crick
G-A
C-G,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 542 GA sheared
5' 3'
C-G,Watson-Crick
G-A
G A,*
3' 5'GGAA tetraloop 543 GA sheared
5' 3'
C-G,Watson-Crick
G-A
G A,*
3' 5'Dienococcus Radiodurans 23S RNA 544 GA sheared
5' 3'
C-G,Watson-Crick
G-A
G A,*
3' 5'SRP19 545 GA sheared
5' 3'
C-G,Watson-Crick
G-A
G A,*
3' 5'Active Group I ribozyme-product 546 GA sheared
5' 3'
C-G,Watson-Crick
G-A
G A,*
3' 5'GAAA tetraloop 547 GA sheared
5' 3'
C-G,Watson-Crick
G-A
G A,*
3' 5'GGAA tetraloop 548 GA sheared
5' 3'
C-G,Watson-Crick
G-A
G C,*
3' 5'Structure of the 30S ribosomal subunit 549 GA sheared
5' 3'
C-G,Watson-Crick
G-A
G-A,amino-N7
3' 5'Atomic structure of the large ribosomal subunit 550 GA sheared
5' 3'
C-G,Watson-Crick
G-A
G-A,sheared
3' 5'Structure of the 30S ribosomal subunit 551 GA sheared
5' 3'
C-G,Watson-Crick
G-A
G-A,sheared
3' 5'45 RNA dimer, central internal loop 552 GA sheared
5' 3'
C-G,Watson-Crick
G-A
U C,*
3' 5'Ribosomal protein L11-RNA complex 553 GA sheared
5' 3'
C-G,Watson-Crick
G-A
U U,*
3' 5'C-GUAAUA-G hairpin found in ribosomal RNA 554 GA sheared
5' 3'
C-G,Watson-Crick
G-A
U U,*
3' 5'Hairpin Loop C-(GUAAUA)-G 555 GA sheared
5' 3'
C-G,Watson-Crick
G-A
U-A,4-carbonyl-amino
3' 5'Structure of the 30S ribosomal subunit 556 GA sheared
5' 3'
C-G,Watson-Crick
G-A
U-U,imino-carbonyl
3' 5'Mismatches in RNA 557 GA sheared
5' 3'
C-G,Wstson-Crick
G-A
U U,*
3' 5'Atomic structure of the large ribosomal subunit 558 GA sheared
5' 3'
G A,*
G-A
A G,*
3' 5'Dienococcus Radiodurans 23S RNA 559 GA sheared
5' 3'
G A,*
G-A
A-G,sheared
3' 5'Atomic structure of the large ribosomal subunit 560 GA sheared
5' 3'
G G,*
G-A
A G,*
3' 5'Atomic structure of the large ribosomal subunit 561 GA sheared
5' 3'
G G,*
G-A
A-C,N1-amino
3' 5'Structure of the 30S ribosomal subunit 562 GA sheared
5' 3'
G-A, sheared
G-A
C C,*
3' 5'Group I Intron 563 GA sheared
5' 3'
G-A,amino-N7
A-G
G-U,Wobble
3' 5'Structure of the 30S ribosomal subunit 564 GA sheared
5' 3'
G-A,sheared
A-G
G-C,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 565 GA sheared
5' 3'
G-A,sheared
G-A
A G,*
3' 5'Dienococcus Radiodurans 23S RNA 566 GA sheared
5' 3'
G-A,sheared
G-A
A-G,sheared
3' 5'45 RNA dimer, central internal loop 567 GA sheared
5' 3'
G-A,sheared
G-A
A-G,sheared
3' 5'Atomic structure of the large ribosomal subunit 568 GA sheared
5' 3'
G-A,sheared
G-A
C A,*
3' 5'Atomic structure of the large ribosomal subunit 569 GA sheared
5' 3'
G-A,Sheared
G-A
C C,*
3' 5'Group I intron ribozyme 570 GA sheared
5' 3'
G-A,sheared
G-A
G-A,sheared
3' 5'Structure of the 30S ribosomal subunit 571 GA sheared
5' 3'
G-A,Sheared
G-A
U-G,Wobble
3' 5'P5abc domain of the group I intron of T. thermopila 572 GA sheared
5' 3'
G-A,sheared
G-A
U-U,4-carbonyl-imino,imino-2-carbonyl
3' 5'Structure of the 30S ribosomal subunit 573 GA sheared
5' 3'
G-C, Watson-Crick
G-A
3' 5'Dienococcus Radiodurans 23S RNA 574 GA sheared
5' 3'
G-C,Watson-Crick
G-A
A A,*
3' 5'L1 ribosomal protein-autoregulatory mRNA complex 575 GA sheared
5' 3'
G-C,Watson-Crick
G-A
A A,*
3' 5'Metal binding site in P5 stem of group I intron 576 GA sheared
5' 3'
G-C,Watson-Crick
G-A
A A,*
3' 5'Group I intron ribozyme 577 GA sheared
5' 3'
G-C,Watson-Crick
G-A
A C,*
3' 5'Ribosomal protein L11-RNA complex 578 GA sheared
5' 3'
G-C,Watson-Crick
G-A
A C,*
3' 5'Atomic structure of the large ribosomal subunit 579 GA sheared
5' 3'
G-C,Watson-Crick
G-A
A G,*
3' 5'Atomic structure of the large ribosomal subunit 580 GA sheared
5' 3'
G-C,Watson-Crick
G-A
A U,*
3' 5'Dienococcus Radiodurans 23S RNA 581 GA sheared
5' 3'
G-C,Watson-Crick
G-A
A-A,N7-amino,symmetric
3' 5'Structure of the 30S ribosomal subunit 582 GA sheared
5' 3'
G-C,Watson-Crick
G-A
A-A,N7-amino,sym
3' 5'Atomic structure of the large ribosomal subunit (5S) 583 GA sheared
5' 3'
G-C,Watson-Crick
G-A
A-C,reverse Hoogsteen
3' 5'Structure of the 30S ribosomal subunit 584 GA sheared
5' 3'
G-C,Watson-Crick
G-A
3' 5'Dienococcus Radiodurans 23S RNA 585 GA sheared
5' 3'
G-C,Watson-Crick
G-A
A-U,Reverse Hoogsteen
3' 5'SRL of 28S rRNA 586 GA sheared
5' 3'
G-C,Watson-Crick
G-A
A-U,Reverse Hoogsteen
3' 5'SRL of 23S rRNA 587 GA sheared
5' 3'
G-C,Watson-Crick
G-A
A-U,Reverse Hoogsteen
3' 5'SRL of 28S rRNA 588 GA sheared
5' 3'
G-C,Watson-Crick
G-A
A-U,reverse Hoogsteen
3' 5'Structure of the 30S ribosomal subunit 589 GA sheared
5' 3'
G-C,Watson-Crick
G-A
A-U,Reverse Hoogsteen
3' 5'5S rRNA loop E 590 GA sheared
5' 3'
G-C,Watson-Crick
G-A
A-U,Reverse Hoogsteen
3' 5'SRL of 28S rRNA 591 GA sheared
5' 3'
G-C,Watson-Crick
G-A
A-U,reverse Hoogsteen
3' 5'Group II intron branch site 592 GA sheared
5' 3'
G-C,Watson-Crick
G-A
A-U,Watson-Crick
3' 5'Restrictocin-inhibitor complexes 593 GA sheared
5' 3'
G-C,Watson-Crick
G-A
C G,*
3' 5'Domain E of Thermus flavus 5S rRNA 594 GA sheared
5' 3'
G-C,Watson-Crick
G-A
G A,*
3' 5'Atomic structure of the large ribosomal subunit 595 GA sheared
5' 3'
G-C,Watson-Crick
G-A
U-A,Hoogsteen
3' 5'Atomic structure of the large ribosomal subunit 596 GA sheared
5' 3'
G-C,Watson-Crick
G-A
U-A,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 597 GA sheared
5' 3'
G-C,Watson-Crick
G-A
U-U,imino-carbonyl
3' 5'Mismatches in RNA 598 GA sheared
5' 3'
G-U,wobble
G-A
A-U,reverse Hoogsteen
3' 5'Structure of the 30S ribosomal subunit 599 GA sheared
5' 3'
U A,*
A-G
G-U,Wobble
3' 5'Atomic structure of the large ribosomal subunit 600 GA sheared
5' 3'
U A,*
G-A
A A,*
3' 5'Atomic structure of the large ribosomal subunit GA sheared
5' 3'
U A,*
G-A
A A,*
3' 5'Atomic structure of the large ribosomal subunit more info... 601 GA sheared
5' 3'
U A,*
G-A
A-G,Sheared
3' 5'Hammerhead ribozyme 602 GA sheared
5' 3'
U A,*
G-A
C A,*
3' 5'Atomic structure of the large ribosomal subunit 603 GA sheared
5' 3'
U A,*
G-A
G U,amino-4-carbonyl
3' 5'Structure of the 30S ribosomal subunit 604 GA sheared
5' 3'
U A,*
G-A
U C,*
3' 5'Stem loop IIa 605 GA sheared
5' 3'
U A,*
G-A
U-A,reverse Hoogteen
3' 5'Atomic structure of the large ribosomal subunit 606 GA sheared
5' 3'
U C,*
G-A
A-U,Reverse Hoogsteen
3' 5'Structure of the 30S ribosomal subunit 607 GA sheared
5' 3'
U G,*
G-A
A C,*
3' 5'Structure of the 30S ribosomal subunit 608 GA sheared
5' 3'
U G,*
G-A
A G,*
3' 5'Atomic structure of the large ribosomal subunit 609 GA sheared
5' 3'
U G,*
G-A
A-G,sheared
3' 5'U4 snRNA fragment/15.5KD protein complex 610 GA sheared
5' 3'
U G,*
G-A
G-A,sheared
3' 5'Dienococcus Radiodurans 23S RNA 611 GA sheared
5' 3'
U-A, Watson-Crick
G-A
C U,*
3' 5'Extended U6 ISL as observed in the U2/U6 complex from Saccharomyces cerevisiae 612 GA sheared
5' 3'
U-A,2-carbonyl-amino
G-A
A-G,Sheared
3' 5'Hammerhead ribozyme 613 GA sheared
5' 3'
U-A,4-carbonyl-amino(1 bond)
G-A
A U,*
3' 5'Atomic structure of the large ribosomal subunit 614 GA sheared
5' 3'
U-A,4-carbonyl-amino
G-A
G-A,sheared
3' 5'Atomic structure of the large ribosomal subunit 615 GA sheared
5' 3'
U-A,4-carbonyl-amino
G-A
U-A,Hoogsteen
3' 5'Atomic structure of the large ribosomal subunit 616 GA sheared
5' 3'
U-A,Hoogsteen
A-G
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 617 GA sheared
5' 3'
U-A,N1-4-carbonyl
G-A
A-G,sheared
3' 5'Atomic structure of the large ribosomal subunit 618 GA sheared
5' 3'
U-A,reverse Hoogsteen
A-G
A-U,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 619 GA sheared
5' 3'
U-A,reverse Hoogsteen
A-G
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit (5S) 620 GA sheared
5' 3'
U-A,reverse Hoogsteen
G-A
G-C,Watson-crick
3' 5'Structure of the 30S ribosomal subunit 621 GA sheared
5' 3'
U-A,reverse Hoogteen
A-G
G-C,Watson-Crick
3' 5'SRP19 622 GA sheared
5' 3'
U-A,Watson-Crick
G-A
A A,*
3' 5'RNA stem-loop of 3' of eel LINE element 623 GA sheared
5' 3'
U-A,Watson-Crick
G-A
A A,*
3' 5'N36 peptide-binding RNA of Bacteriophage lamda, boxB hairpin 624 GA sheared
5' 3'
U-A,Watson-Crick
G-A
A A,*
3' 5'Dienococcus Radiodurans 23S RNA 625 GA sheared
5' 3'
U-A,Watson-Crick
G-A
A G,*
3' 5'Bacteriophage lamda N boxB RNA 626 GA sheared
5' 3'
U-A,Watson-Crick
G-A
A-A,N7-amino,symmetric
3' 5'Specificity domain of RNAse P 627 GA sheared
5' 3'
U-A,Watson-Crick
G-A
A-G,Sheared
3' 5'(GGGCUGAAGCCU)2-duplex 628 GA sheared
5' 3'
U-A,Watson-Crick
G-A
A-U,Hoogsteen
3' 5'Atomic structure of the large ribosomal subunit GA sheared
5' 3'
U-A,Watson-Crick
G-A
A-U,Hoogsteen
3' 5'Atomic structure of the large ribosomal subunit more info... 629 GA sheared
5' 3'
U-A,Watson-Crick
G-A
A-U,reverse Hoogsteen
3' 5'Dienococcus Radiodurans 23S RNA 630 GA sheared
5' 3'
U-A,Watson-Crick
G-A
C A,*
3' 5'P5abc sub-domain of group I intron 631 GA sheared
5' 3'
U-A,Watson-Crick
G-A
G G,*
3' 5'Structure of the 30S ribosomal subunit 632 GA sheared
5' 3'
U-A,Watson-Crick
G-A
U A,*
3' 5'HIV-1 A-rich RNA 633 GA sheared
5' 3'
U-A,Watson-Crick
G-A
U C,*
3' 5'Atomic structure of the large ribosomal subunit 634 GA sheared
5' 3'
U-C,*
G-A
A-U,Watson-Crick
3' 5'U6 stem loop RNA 635 GA sheared
5' 3'
U-G, wobble
G-A
G-A, sheared
3' 5'Group I Intron 636 GA sheared
5' 3'
U-G, Wobble
G-A
G-A, sheared
3' 5'Group I Intron 637 GA sheared
5' 3'
U-G,2-carbonyl-amino
G-A
G-A,amino-N3
3' 5'Structure of the 30S ribosomal subunit 638 GA sheared
5' 3'
U-G,Wobble
G-A
A A,*
3' 5'Atomic structure of the large ribosomal subunit 639 GA sheared
5' 3'
U-G,wobble
G-A
A A,*
3' 5'Group II sp intron 640 GA sheared
5' 3'
U-G,Wobble
G-A
A A,*
3' 5'Atomic structure of the large ribosomal subunit 641 GA sheared
5' 3'
U-G,Wobble
G-A
A A,*
3' 5'Structure of the 30S ribosomal subunit 642 GA sheared
5' 3'
U-G,Wobble
G-A
A G,*
3' 5'Dienococcus Radiodurans 23S RNA 643 GA sheared
5' 3'
U-G,wobble
G-A
A G,*
3' 5'HCV IRES IIIe 644 GA sheared
5' 3'
U-G,wobble
G-A
A G,*
3' 5'Structure of the 30S ribosomal subunit 645 GA sheared
5' 3'
U-G,wobble
G-A
A-U,reverse Hoogsteen
3' 5'Atomic structure of the large ribosomal subunit 646 GA sheared
5' 3'
U-G,Wobble
G-A
A-U,reverse Hoogsteen
3' 5'Atomic structure of the large ribosomal subunit 647 GA sheared
5' 3'
U-G,Wobble
G-A
G-A,sheared
3' 5'Atomic structure of the large ribosomal subunit 648 GA sheared
5' 3'
U-G,Wobble
G-A
G-A,Sheared
3' 5'Group I intron ribozyme 649 GA sheared
5' 3'
U-G,Wobble
G-A
G-A,sheared
3' 5'Atomic structure of the large ribosomal subunit GA sheared
5' 3'
U-G,Wobble
G-A
G-A,sheared
3' 5'Atomic structure of the large ribosomal subunit more info... 650 GA sheared
5' 3'
U-G,Wobble
G-A
U A,*
3' 5'Atomic structure of the large ribosomal subunit 651 GA sheared
5' 3'
U-G,Wobble
G-A
U U,*
3' 5'Atomic structure of the large ribosomal subunit 652 GA sheared
5' 3'
U-G,
G-A
3' 5'Group I Intron 653 GG N7-imino
5' 3'
A A,*
G-G
A C,*
3' 5'Atomic structure of the large ribosomal subunit 654 GG N7-imino
5' 3'
A A,*
G-G
C C,*
3' 5'Atomic structure of the large ribosomal subunit 655 GG N7-imino
5' 3'
A G,*
G-G
A G,*
3' 5'AMP-binding RNA aptamer 656 GG N7-imino
5' 3'
A G,*
G-G
A-U,N3-imino
3' 5'Structure of the 30S ribosomal subunit 657 GG N7-imino
5' 3'
G A,*
G-G
A A,*
3' 5'L30-mRNA complex 658 GG N7-imino
5' 3'
G A,*
G-G
G A,*
3' 5'AMP-RNA Aptamer complex 659 GG N7-imino
5' 3'
U G,*
G-G
C U,*
3' 5'Structure of the 30S ribosomal subunit 660 GG N7-imino
5' 3'
U-G,Wobble
G-G
G-A,Imino
3' 5'16S rRNA of T.thermophilus, Helix22 661 UC 4-carbonyl-amino
5' 3'
A A,*
U-C
C-G,*
3' 5'Structure of the 30S ribosomal subunit 662 UC 4-carbonyl-amino
5' 3'
A U,*
U-C
G G,*
3' 5'Atomic structure of the large ribosomal subunit 663 UC 4-carbonyl-amino
5' 3'
A-U,Watson-Crick
U-C
G-C,Watson-Crick
3' 5'Dienococcus Radiodurans 23S RNA 664 UC 4-carbonyl-amino
5' 3'
G-C,Watson-Crick
U-C
C-G,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 665 UC 4-carbonyl-amino
5' 3'
U-G,Wobble
U-C
C-U,4-carbonyl-amino (1 bond)
3' 5'A brominated 15-nucleotide RNA helix 666 UC 4-carbonyl-amino
5' 3'
U-G,Wobble
U-C
C-U,amino-4-carbonyl
3' 5'C-UUCG-G..C-UUCG-G 667 UC 4-carbonyl-amino
5' 3'
U-U,imino-carbonyl
C-U
U-U,imino-carbonyl
3' 5'Stem-loop D RNA of 5'-UTR of enteroviruses and rhinoviruses 668 UU imino-carbonyl
5' 3'
A G,*
U-U
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 669 UU imino-carbonyl
5' 3'
A-A,*
G-U
U-A, Reverse Hoogsteen
3' 5'Group I Intron 670 UU imino-carbonyl
5' 3'
A-U, Watson-Crick
U-U
G G,*
3' 5'V. Vulnificus A-riboswitch adenine complex 671 UU imino-carbonyl
5' 3'
A-U,Watson-Crick
U-U
G A,*
3' 5'Dienococcus Radiodurans 23S RNA 672 UU imino-carbonyl
5' 3'
A-U,Watson-Crick
U-U
G-C,Watson-Crick
3' 5'L1 Protuberance 673 UU imino-carbonyl
5' 3'
C G,*
U-U
G A,*
3' 5'Hammerhead ribozyme 674 UU imino-carbonyl
5' 3'
C-C,amino-carbonyl(1 bond)
U-U
G-C,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 675 UU imino-carbonyl
5' 3'
C-G,Watson-Crick
U-U
A A,*
3' 5'Structure of the 30S ribosomal subunit 676 UU imino-carbonyl
5' 3'
C-G,Watson-Crick
U-U
C U ,*
3' 5'Atomic structure of the large ribosomal subunit 677 UU imino-carbonyl
5' 3'
C-G,Watson-Crick
U-U
C-U,amino-4-carbonyl
3' 5'Stem-loop D RNA of 5'-UTR of enteroviruses and rhinoviruses 678 UU imino-carbonyl
5' 3'
C-G,Watson-Crick
U-U
U-U,imino-carbonyl
3' 5'RNA internal loop 679 UU imino-carbonyl
5' 3'
C-U,4-carbonyl-imino
U-U
G-C,Watson-Crick
3' 5'Stem-loop D RNA of 5'-UTR of enteroviruses and rhinoviruses 680 UU imino-carbonyl
5' 3'
G U,*
U-U
A C,*
3' 5'Atomic structure of the large ribosomal subunit 681 UU imino-carbonyl
5' 3'
G U,*
U-U
U C,*
3' 5'Atomic structure of the large ribosomal subunit (5S) 682 UU imino-carbonyl
5' 3'
G-A,sheared
U-U
U-A,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 683 UU imino-carbonyl
5' 3'
G-C,Watson-Crick
U-U
A C,*
3' 5'U2 small nuclear RNA 684 UU imino-carbonyl
5' 3'
G-C,Watson-Crick
U-U
A-G,Sheared
3' 5'Mismatches in RNA 685 UU imino-carbonyl
5' 3'
G-C,Watson-Crick
U-U
C-G,Watson-Crick
3' 5'A site of 16S rRNA complexed with aminoglycoside 686 UU imino-carbonyl
5' 3'
G-C,Watson-Crick
U-U
C-G,Watson-Crick
3' 5'A site of 16S rRNA 687 UU imino-carbonyl
5' 3'
G-C,Watson-Crick
U-U
G U,*
3' 5'Atomic structure of the large ribosomal subunit 688 UU imino-carbonyl
5' 3'
G-C,Watson-Crick
U-U
3' 5'Atomic structure of the large ribosomal subunit 689 UU imino-carbonyl
5' 3'
G-C,Watson-Crick
U-U
G-U,Wobble
3' 5'Mismatches in RNA 690 UU imino-carbonyl
5' 3'
G-C,Watson-Crick
U-U
U A,*
3' 5'Atomic structure of the large ribosomal subunit 691 UU imino-carbonyl
5' 3'
G-C,Watson-Crick
U-U
U G,*
3' 5'Structure of the 30S ribosomal subunit 692 UU imino-carbonyl
5' 3'
G-C,Watson-Crick
U-U
U-G,imino-carbonyl
3' 5'Mismatches in RNA 693 UU imino-carbonyl
5' 3'
G-C,Watson-Crick
U-U
U-U,imino-carbonyl
3' 5'Mismatches in RNA 694 UU imino-carbonyl
5' 3'
G-U,Wobble
U-U
G-C,Watson-Crick
3' 5'Mismatches in RNA 695 UU imino-carbonyl
5' 3'
U G,*
U-U
C U,*
3' 5'Atomic structure of the large ribosomal subunit (5S) 696 UU imino-carbonyl
5' 3'
U-G,Wobble
U-U
G-C,Watson-Crick
3' 5'Mismatches in RNA 697 UU imino-carbonyl
5' 3'
U-G,Wobble
U-U
U-U,imino-carbonyl
3' 5'(GGACUUUGGUCC)2-duplex 698 AC reverse wobble
5' 3'
A G,*
A-C
U A,*
3' 5'HCV IRES eIF3 binding site 699 AU Hoogsteen
5' 3'
A A,*
A-U
A G,*
3' 5'Structure of the 30S ribosomal subunit 700 AU Hoogsteen
5' 3'
A A,*
A-U
G G,*
3' 5'Structure of the 30S ribosomal subunit 701 AU Hoogsteen
5' 3'
A A,*
A-U
G G,*
3' 5'Group I Intron AU Hoogsteen
5' 3'
A A,*
A-U
G G,*
3' 5'Group I Intron more info... 702 AU Hoogsteen
5' 3'
A G,*
A-U
U C,*
3' 5'Atomic structure of the large ribosomal subunit 703 AU Hoogsteen
5' 3'
A U,*
A-U
G U,*
3' 5'Atomic structure of the large ribosomal subunit 704 AU Hoogsteen
5' 3'
A-G, N7-amino
A-U
U U,*
3' 5'Group I Intron 705 AU Hoogsteen
5' 3'
C G,*
A-S4U
G G,*
3' 5'Methionyl-tRNAFMET formyltransferase 706 AU Hoogsteen
5' 3'
C G,*
A-U
C U,*
3' 5'Theophylline binding RNA 707 AU Hoogsteen
5' 3'
G A,*
A-U
A A,*
3' 5'Atomic structure of the large ribosomal subunit 708 AU Hoogsteen
5' 3'
G C,*
A-U
A A,*
3' 5'Atomic structure of the large ribosomal subunit 709 AU Hoogsteen
5' 3'
G C,*
A-U
G A,*
3' 5'HIV-1 TAR RNA-Tat peptide complex 710 AU Hoogsteen
5' 3'
G G,*
A-U
A C,*
3' 5'Atomic structure of the large ribosomal subunit 711 AU Hoogsteen
5' 3'
G G,*
A-U
U C,*
3' 5'Atomic structure of the large ribosomal subunit 712 AU Hoogsteen
5' 3'
G U,*
A-U
G G,*
3' 5'Ribosomal protein L11-RNA complex 713 AU Hoogsteen
5' 3'
G-A,amino-N1, N3-amino
A-U
A-U, Hoogsteen
3' 5'Human Telomerase RNA psuedoknot 714 AU Hoogsteen
5' 3'
U U,*
A-U
C U,*
3' 5'Atomic structure of the large ribosomal subunit 715 AU Hoogsteen
5' 3'
U-U, 2-carbonyl-C5-H,imino-4-carbonyl
A-U
G G,*
3' 5'Structure of the 30S ribosomal subunit 716 AU reverse Watson-Crick
5' 3'
A 5MC,*
A-U
D D,*
3' 5'Arginyl-tRNA Synthetase 717 AU reverse Watson-Crick
5' 3'
A C,*
A-U
D A,*
3' 5'Yeast tRNA (Asp) 718 AU reverse Watson-Crick
5' 3'
A U,*
A-U
G U,*
3' 5'Ribosomal protein L11-RNA complex 719 AU reverse Watson-Crick
5' 3'
A U,*
A-U
G U,*
3' 5'Specificity domain of RNAse P 720 AU reverse Watson-Crick
5' 3'
A U,*
U-A
C C,*
3' 5'Structure of the 30S ribosomal subunit 721 AU reverse Watson-Crick
5' 3'
A-A,amino-N7,symmetric
A-U
A A,*
3' 5'Atomic structure of the large ribosomal subunit 722 AU reverse Watson-Crick
5' 3'
A-A,N7-amino, symmetric
A-U
A A,*
3' 5'Atomic structure of the large ribosomal subunit 723 AU reverse Watson-Crick
5' 3'
C C,*
A-U
C G,*
3' 5'Atomic structure of the large ribosomal subunit 724 AU reverse Watson-Crick
5' 3'
C G,*
A-U
C A,*
3' 5'Atomic structure of the large ribosomal subunit 725 AU reverse Watson-Crick
5' 3'
C G,*
A-U
C C,*
3' 5'Structure of the 30S ribosomal subunit 726 AU reverse Watson-Crick
5' 3'
C U,*
A-U
U C,*
3' 5'Structure of the 30S ribosomal subunit 727 AU reverse Watson-Crick
5' 3'
G A,*
A-U
A C,*
3' 5'Atomic structure of the large ribosomal subunit 728 AU reverse Watson-Crick
5' 3'
G A,*
A-U
A G,*
3' 5'Atomic structure of the large ribosomal subunit 729 AU reverse Watson-Crick
5' 3'
G G,*
A-U
C C,*
3' 5'Structure of the 30S ribosomal subunit 730 AU reverse Watson-Crick
5' 3'
G G,*
A-U
U G,*
3' 5'Dienococcus Radiodurans 23S RNA 731 AU reverse Watson-Crick
5' 3'
G U,*
A-U
A-U,Watson-Crick
3' 5'50S rRNA fragment-L11 binding region 732 AU reverse Watson-Crick
5' 3'
U A,*
A-U
A C,*
3' 5'Structure of the 30S ribosomal subunit 733 AU reverse Watson-Crick
5' 3'
U G,*
A-U
U U,*
3' 5'Atomic structure of the large ribosomal subunit 734 CG reverse Watson-Crick
5' 3'
A G,*
G-C
A G,*
3' 5'Atomic structure of the large ribosomal subunit 735 CG reverse Watson-Crick
5' 3'
A G,*
G-C
C G,*
3' 5'Prolyl-tRNA Synthetase form Thermus Thermophilus 736 CG reverse Watson-Crick
5' 3'
A G,*
G-C
C U,*
3' 5'Methionyl-tRNAFMET formyltransferase 737 CG reverse Watson-Crick
5' 3'
A U,*
G-C
C C,*
3' 5'tRNA apatamer 738 CG reverse Watson-Crick
5' 3'
A U,*
G-C
C G,*
3' 5'tRNA (Val) 739 CG reverse Watson-Crick
5' 3'
A U,*
G-C
D U,*
3' 5'Yeast Phenylalanine tRNA 740 CG reverse Watson-Crick
5' 3'
A U,*
G-C
G G,*
3' 5'tRNA (Ile) 741 CG reverse Watson-Crick
5' 3'
A U,*
G-C
U G,*
3' 5'tRNA (Thr) 742 CG reverse Watson-Crick
5' 3'
G-C,Watson-Crick
G-C
C-G,Watson-Crick
3' 5'Domain E of Thermus flavus 5S rRNA 743 CG reverse Watson-Crick
5' 3'
U A,*
G-C
C A,*
3' 5'Atomic structure of the large ribosomal subunit 744 CG reverse Watson-Crick
5' 3'
U C,*
C-G
G A,*
3' 5'tRNA (tyr) 745 CG reverse Watson-Crick
5' 3'
U D,*
C-G
C A,*
3' 5'Yeast tRNA (Phe) 746 CG reverse Watson-Crick
5' 3'
U-U,imino-4-carbonyl
G-C
C *,*
3' 5'Group I Intron 747 GC Hoogsteen
5' 3'
U-U,4-carbonyl-imino,Ch5-2-carbonyl
G-C
C *,*
3' 5'Group I Intron 748 GC N3-amino, amino-N3
5' 3'
G C,*
G-C
U G,*
3' 5'Atomic structure of the large ribosomal subunit (5S) 749 GC N3-amino, amino-N3
5' 3'
G G,*
G-C
U C,*
3' 5'Atomic structure of the large ribosomal subunit (5S) 750 GC N3-amino, amino-N3
5' 3'
U-G,Wobble
G-C
G G,*
3' 5'Peptidyl transferase centre 751 GU reverse wobble
5' 3'
A G,*
G-U
C U,*
3' 5'tRNA apatamer 752 GU reverse wobble
5' 3'
G U,*
G-U
U G, *
3' 5'HCV IRES IIIdwt 753 AA N1-amino, symmetric
5' 3'
A A,*
A-A
G-C,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 754 AA N1-amino, symmetric
5' 3'
A C,*
A-A
G C,*
3' 5'Atomic structure of the large ribosomal subunit 755 AA N1-amino, symmetric
5' 3'
A G,*
A-A
A G,*
3' 5'Atomic structure of the large ribosomal subunit 756 AA N1-amino, symmetric
5' 3'
A G,*
A-A
U A,*
3' 5'Atomic structure of the large ribosomal subunit 757 AA N1-amino, symmetric
5' 3'
C C,*
A-A
G U,*
3' 5'Structure of the 30S ribosomal subunit 758 AA N1-amino, symmetric
5' 3'
C G,*
A-A
G G,*
3' 5'Atomic structure of the large ribosomal subunit AA N1-amino, symmetric
5' 3'
C G,*
A-A
G G,*
3' 5'Atomic structure of the large ribosomal subunit more info... 759 AA N1-amino, symmetric
5' 3'
G A,*
A-A
A A,*
3' 5'Atomic structure of the large ribosomal subunit 760 AA N1-amino, symmetric
5' 3'
G A,*
A-A
C-G,Watson-Crick
3' 5'HIV-1 rev-RNA complex 761 AA N1-amino, symmetric
5' 3'
G G,*
A-A
U C,*
3' 5'Structure of the 30S ribosomal subunit 762 AA N1-amino, symmetric
5' 3'
G G,*
A-A
U C,*
3' 5'16S rRNA of T. thermophilus, Tth T4 RNA, helix 23a 763 AA N1-amino, symmetric
5' 3'
G U,*
A-A
A U,*
3' 5'Group I Intron AA N1-amino, symmetric
5' 3'
G U,*
A-A
A U,*
3' 5'Group I Intron more info... 764 AA N1-amino, symmetric
5' 3'
G-U,*
A-A
A-U,*
3' 5'Group I Intron 765 AA N1-amino, symmetric
5' 3'
U A,*
A-A
G-G,N3-amino,symmetric
3' 5'SRP19 766 AA N7-amino, symmetric
5' 3'
A A,*
A-A
C A,*
3' 5'Atomic structure of the large ribosomal subunit 767 AA N7-amino, symmetric
5' 3'
A C,*
A-A
G A,*
3' 5'Atomic structure of the large ribosomal subunit 768 AA N7-amino, symmetric
5' 3'
A G,*
A-A
A A,*
3' 5'Specificity domain of RNAse P 769 AA N7-amino, symmetric
5' 3'
A G,*
A-A
A-G,sheared
3' 5'Atomic structure of the large ribosomal subunit 770 AA N7-amino, symmetric
5' 3'
A G,*
A-A
A-G,sheared
3' 5'HCV IRES IIId 771 AA N7-amino, symmetric
5' 3'
A G,*
A-A
C-C,amino-carbonyl(1 bond)
3' 5'Atomic structure of the large ribosomal subunit 772 AA N7-amino, symmetric
5' 3'
A U,*
A-A
A U,*
3' 5'loop B of hairpin ribozyme 773 AA N7-amino, symmetric
5' 3'
A-C,amino-2-carbonyl
A-A
G U,*
3' 5'Atomic structure of the large ribosomal subunit 774 AA N7-amino, symmetric
5' 3'
A-U,reverse Hoogsteen
A-A
3' 5'Dienococcus Radiodurans 23S RNA AA N7-amino, symmetric
5' 3'
A-U,reverse Hoogsteen
A-A
3' 5'Dienococcus Radiodurans 23S RNA more info... 775 AA N7-amino, symmetric
5' 3'
A-U,Watson-Crick
A-A
C-C,carbonyl-amino
3' 5'Restrictocin-inhibitor complexes 776 AA N7-amino, symmetric
5' 3'
C C
A-A
G A
3' 5'SRL of 28S rRNA 777 AA N7-amino, symmetric
5' 3'
G A,*
A-A
A-C,amino-carbonyl(1 bond)
3' 5'Atomic structure of the large ribosomal subunit 778 AA N7-amino, symmetric
5' 3'
G A,sheared
A-A
G A,*
3' 5'Atomic structure of the large ribosomal subunit (5S) 779 AA N7-amino, symmetric
5' 3'
G C,*
A-A
A C,*
3' 5'Specificity domain of A-type ribonuclease P 780 AA N7-amino, symmetric
5' 3'
G G,*
A-A
A G,*
3' 5'Dienococcus Radiodurans 23S RNA 781 AA N7-amino, symmetric
5' 3'
G U,*
A-A
G A,*
3' 5'Atomic structure of the large ribosomal subunit 782 AA N7-amino, symmetric
5' 3'
G-A,sheared
A-A
G A,*
3' 5'Structure of the 30S ribosomal subunit 783 AA N7-amino, symmetric
5' 3'
G-A,sheared
A-A
G A,*
3' 5'Specificity domain of RNAse P 784 AA N7-amino, symmetric
5' 3'
U A,*
A-A
G G,*
3' 5'Yeast tRNA (Asp) 785 AA N7-amino, symmetric
5' 3'
U G,*
A-A
C-A,amino-N3
3' 5'Atomic structure of the large ribosomal subunit 786 AA N7-amino, symmetric
5' 3'
U-A, reverse Hoogsteen
A-A
U U,*
3' 5'V. Vulnificus A-riboswitch adenine complex 787 AA N7-amino, symmetric
5' 3'
U-C 2-carbonyl-amino
A-A
G A,*
3' 5'Atomic structure of the large ribosomal subunit 788 AA N7-amino, symmetric
5' 3'
U-C,2-carbonyl-amino(1 bond)
A-A
G A,*
3' 5'Atomic structure of the large ribosomal subunit AA N7-amino, symmetric
5' 3'
U-C,2-carbonyl-amino(1 bond)
A-A
G A,*
3' 5'Atomic structure of the large ribosomal subunit more info... 789 AA N7-amino, symmetric
5' 3'
U-C,2-carbonyl-amino
A-A
G A,*
3' 5'Atomic structure of the large ribosomal subunit 790 AA N7-amino, symmetric
5' 3'
U-U,2 carbonyl-imino,symmetric
A-A
G A,*
3' 5'Structure of the 30S ribosomal subunit 791 AG N3-amino, amino-N1
5' 3'
A A,*
G-A
G C,*
3' 5'Atomic structure of the large ribosomal subunit 792 AG N3-amino, amino-N1
5' 3'
A C,*
A-G
C A,*
3' 5'Structure of the 30S ribosomal subunit 793 AG N3-amino, amino-N1
5' 3'
A C,*
G-A
A G,*
3' 5'Structure of the 30S ribosomal subunit 794 AG N3-amino, amino-N1
5' 3'
A U,*
G-A
U U,*
3' 5'Specificity domain of RNAse P 795 AG N3-amino, amino-N1
5' 3'
G A,*
G-A
A-G,amino-N3,N1-amino
3' 5'Structure of the 30S ribosomal subunit 796 AG N3-amino, amino-N1
5' 3'
G-A,N3-amino,amino-N1
A-G
C G,*
3' 5'Structure of the 30S ribosomal subunit 797 GA N7-N1,amino carbonyl
5' 3'
G G,*
G-A
U G,*
3' 5'Specificity domain of A-type ribonuclease P 798 GA N7-N1,amino carbonyl
5' 3'
U G,*
G-A
G G,*
3' 5'16S rRNA of T. thermophilus, Tth T4 RNA, helices 22 & 23a 799 GA N7-N1,amino carbonyl
5' 3'
U G,*
G-A
G G,*
3' 5'Structure of the 30S ribosomal subunit 800 GA N7-N1,amino carbonyl
5' 3'
U U,*
G-A
C G,*
3' 5'Atomic structure of the large ribosomal subunit (5S) 801 GA+ carbonyl-amino, N7-N1
5' 3'
A-U,Watson-Crick
A-G
U-A,Watson-Crick
3' 5'(GCAGAGUUAAAUCUGC)2-duplex 802 GG N1-carbonyl, N7-amino
5' 3'
A-U,Watson-Crick
G-G
U G,*
3' 5'RNA aptamer 803 GG N1-carbonyl, N7-amino
5' 3'
C-G,Watson-Crick
G-G
G-A,Imino
3' 5'RRE(Rev response element) of HIVI 804 GG N1-carbonyl, N7-amino
5' 3'
G *
G-G
* *,*
3' 5'Group 1 intron 805 GG N1-carbonyl, N7-amino
5' 3'
G G,*
G-G
G U,*
3' 5'Atomic structure of the large ribosomal subunit 806 GG N1-carbonyl, N7-amino
5' 3'
G U,*
G-G
C-G,Watson-Crick
3' 5'Rev Binding Element (RBE), all 4 RNA double helices of the 4 duplexes (2 TypeI duplexes and 2 TypeII 807 GG N1-carbonyl, N7-amino
5' 3'
U C,*
G-G
C G,*
3' 5'AMP-binding RNA aptamer 808 GG N1-carbonyl, N7-amino
5' 3'
U C,*
G-G
U A,*
3' 5'AMP-RNA Aptamer complex 809 GG N1-carbonyl, symmetric
5' 3'
G U,*
G-G
C-G,Watson-Crick
3' 5'HIV-1 rev-RNA complex 810 GG N1-carbonyl, symmetric
5' 3'
G-A,imino
G-G
C-G,Watson-Crick
3' 5'Rev peptide binding RRE RNA 811 GG N3-amino, symmetric
5' 3'
A C,*
G-G
A A,*
3' 5'Atomic structure of the large ribosomal subunit 812 GG N3-amino, symmetric
5' 3'
A G,*
G-G
A A,*
3' 5'Atomic structure of the large ribosomal subunit 813 GG N3-amino, symmetric
5' 3'
A U,*
G-G
A U,*
3' 5'Structure of the 30S ribosomal subunit 814 GG N3-amino, symmetric
5' 3'
A-A,N1-amino,symmetric
G-G
G G,*
3' 5'SRP19 815 GG N3-amino, symmetric
5' 3'
G A,*
G-G
A U,*
3' 5'Atomic structure of the large ribosomal subunit 816 CC carbonyl-amino, symmetric
5' 3'
G U,*
C-C
G A,*
3' 5'tRNA (Cys) 817 UC 2-carbonyl-amino
5' 3'
A A,*
C-U
U A,*
3' 5'Atomic structure of the large ribosomal subunit 818 UC 2-carbonyl-amino
5' 3'
A-U,Watson-Crick
U-C
A-A,N7-amino,symmetric
3' 5'Atomic structure of the large ribosomal subunit 819 UC 2-carbonyl-amino
5' 3'
C A,*
U-C
G C,*
3' 5'Atomic structure of the large ribosomal subunit 820 UC 2-carbonyl-amino
5' 3'
C-G,Watson-Crick
U-C
A A,*
3' 5'Structure of the 30S ribosomal subunit 821 UC 2-carbonyl-amino
5' 3'
C-G,Watson-Crick
U-C
C G,*
3' 5'Atomic structure of the large ribosomal subunit 822 UC 2-carbonyl-amino
5' 3'
G-C,Watson-Crick
U-C
U G,*
3' 5'Structure of the 30S ribosomal subunit 823 UC 2-carbonyl-amino
5' 3'
U-G,Wobble
U-C
A-A,N7-amino,symmetric
3' 5'Atomic structure of the large ribosomal subunit 824 UU 2-carbonyl-imino, symmetric
5' 3'
C A,*
U-U
A-A,amino-N7,symmetric
3' 5'Structure of the 30S ribosomal subunit 825 UU 2-carbonyl-imino, symmetric
5' 3'
U U,*
U-U
U-A,2-carbonyl-N7
3' 5'Structure of the 30S ribosomal subunit 826 UU 4-carbonyl-imino, symmetric
5' 3'
U G,*
U-U
A A,*
3' 5'Atomic structure of the large ribosomal subunit 827 UU 4-carbonyl-imino, symmetric
5' 3'
U-A,Watson-Crick
U-U
U G
3' 5'Tobramycin-RNA aptamer 828 AA amino-N3 (1 bond)
5' 3'
A G,*
A-A
C-G,Watson-Crick
3' 5'Dienococcus Radiodurans 23S RNA 829 AA amino-N3 (1 bond)
5' 3'
A-A, N3-amino
A-A
A U,*
3' 5'Group I Intron 830 AA amino-N3 (1 bond)
5' 3'
A-A,N3-amino
A-A
A U,*
3' 5'Group I Intron 831 AA amino-N3 (1 bond)
5' 3'
A-U,reverse Hoogsteen
A-A
C-G,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 832 AA amino-N3 (1 bond)
5' 3'
C *,*
A-A
,* G,*
3' 5'Group I Intron 833 AA amino-N3 (1 bond)
5' 3'
C C,*
A-A
U A,*
3' 5'Atomic structure of the large ribosomal subunit (5S) 834 AA amino-N3 (1 bond)
5' 3'
C-C,N3-amino(1 bond)
A-A
A-G,sheared
3' 5'Atomic structure of the large ribosomal subunit 835 AA amino-N3 (1 bond)
5' 3'
C-G,Watson-Crick
A-A
G-A,*
3' 5'AGAA tetraloop 836 AA amino-N3 (1 bond)
5' 3'
G C,*
A-A
C A,*
3' 5'Yeast tRNA (fmet) 837 AA amino-N3 (1 bond)
5' 3'
G-C, Watson-Crick
A-A
A-A,N3-amino
3' 5'Group I Intron 838 AA amino-N3 (1 bond)
5' 3'
G-C,Watson-Crick
A-A
A-A,amino-N3
3' 5'Group I intron ribozyme 839 AA amino-N3 (1 bond)
5' 3'
G-C,Watson-Crick
A-A
A-A,amino-N3
3' 5'tRNA apatamer 840 AA amino-N3 (1 bond)
5' 3'
G-C,Watson-Crick
A-A
A-A,N3-amino
3' 5'Group I Intron 841 AA amino-N3 (1 bond)
5' 3'
G-C,Watson-Crick
A-A
U U,*
3' 5'AUCGCA loop structure 842 AA amino-N3 (1 bond)
5' 3'
U A,*
A-A
A-A,N3-amino
3' 5'Group I intron ribozyme 843 AA amino-N3 (1 bond)
5' 3'
U C,*
A-A
C G,*
3' 5'Atomic structure of the large ribosomal subunit 844 AA amino-N3 (1 bond)
5' 3'
U G,*
A-A
A A,*
3' 5'Dienococcus Radiodurans 23S RNA 845 AA amino-N3 (1 bond)
5' 3'
U U,*
A-C
C-G,Watson-Crick
3' 5'Dienococcus Radiodurans 23S RNA 846 AA amino-N3 (1 bond)
5' 3'
U-A,Hoogsteen
A-A
G-C,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 847 AA amino-N3 (1 bond)
5' 3'
U-C,2-carbonyl-amino
A-A
U A,*
3' 5'loop B of hairpin ribozyme 848 AA N1-amino (1 bond)
5' 3'
A G,amino-carbonyl
A-A
C C,*
3' 5'Atomic structure of the large ribosomal subunit 849 AA N1-amino (1 bond)
5' 3'
A-A,N1-amino
A-A
G U,*
3' 5'Atomic structure of the large ribosomal subunit 850 AA N1-amino (1 bond)
5' 3'
A-G,imino
A-A
G C,*
3' 5'tRNA (Thr) 851 AA N1-amino (1 bond)
5' 3'
A-G,imino
A-A
G-A,imino
3' 5'Structure of the 30S ribosomal subunit 852 AA N1-amino (1 bond)
5' 3'
A-U,reverse Hoogsteen
A-A
A A,*
3' 5'Dienococcus Radiodurans 23S RNA 853 AA N1-amino (1 bond)
5' 3'
A-U,Watson-Crick
A-A
U-G,Wobble
3' 5'Structure of the 30S ribosomal subunit 854 AA N1-amino (1 bond)
5' 3'
C A,*
A-A
G A,*
3' 5'Structure of the 30S ribosomal subunit 855 AA N1-amino (1 bond)
5' 3'
C G,*
A-A
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 856 AA N1-amino (1 bond)
5' 3'
C-G,Watson-Crick
A-A
C A,*
3' 5'Paromycin binding site on the A site of 16S rRNA 857 AA N1-amino (1 bond)
5' 3'
G C,*
A-A
U-A,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 858 AA N1-amino (1 bond)
5' 3'
G-C,Watson-Crick
A-A
C U,*
3' 5'Dienococcus Radiodurans 23S RNA 859 AA N1-amino (1 bond)
5' 3'
G-C,Watson-Crick
A-A
G C,*
3' 5'tRNA apatamer 860 AA N1-amino (1 bond)
5' 3'
G-U,amino-2-carbonyl
A-A
G-C,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 861 AA N1-amino (1 bond)
5' 3'
U A,*
A-A
G-G,amino:imino-carbonyl,bifurcated
3' 5'tRNA (Cys) 862 AA N1-amino (1 bond)
5' 3'
U G,*
A-A
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 863 AA N1-amino (1 bond)
5' 3'
A-A,N1-amino
A-A
G G,*
3' 5'Atomic structure of the large ribosomal subunit 864 AA N7-amino (1 bond)
5' 3'
A G,*
A-A
A-G,sheared
3' 5'Dienococcus Radiodurans 23S RNA 865 AA N7-amino (1 bond)
5' 3'
A G,*
A-A
U C,*
3' 5'Structure of the 30S ribosomal subunit 866 AA N7-amino (1 bond)
5' 3'
C-C,2-carbonyl-amino
A-A
A G,*
3' 5'SRL of 28S rRNA 867 AA N7-amino (1 bond)
5' 3'
C-G,Watson-Crick
A-A
C A,*
3' 5'A site of 16S rRNA 868 AA N7-amino (1 bond)
5' 3'
G U,*
A-A
A A,*
3' 5'Dienococcus Radiodurans 23S RNA 869 AA N7-amino (1 bond)
5' 3'
G-A,sheared
A-A
C-A,amino-N7(1 bond)
3' 5'Atomic structure of the large ribosomal subunit 870 AA N7-amino (1 bond)
5' 3'
G-U,amino-2-carbonyl(1 bond)
A-A
A-U,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 871 AA N7-amino (1 bond)
5' 3'
U *,*
A-A
* G,*
3' 5'S8/RNA complex 872 AC amino,2-carbonyl (1 bond)
5' 3'
A A,*
A-C
G-U,Wobble
3' 5'Atomic structure of the large ribosomal subunit 873 AC amino,2-carbonyl (1 bond)
5' 3'
A PSU,*
OMC-A
U YG,*
3' 5'Yeast Phenylalanine tRNA 874 AC amino,2-carbonyl (1 bond)
5' 3'
A-A,amino,symmetric
A-C
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 875 AC amino,2-carbonyl (1 bond)
5' 3'
A-A,N7-amino
A-C
G-C,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 876 AC amino,2-carbonyl (1 bond)
5' 3'
A-U,amino-2-carbonyl(1 bond)
A-C
U-A,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 877 AC amino,2-carbonyl (1 bond)
5' 3'
C C,*
A-C
C C,*
3' 5'Atomic structure of the large ribosomal subunit 878 AC amino,2-carbonyl (1 bond)
5' 3'
C C,*
A-C
G-C,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 879 AC amino,2-carbonyl (1 bond)
5' 3'
C G,*
A-C
G C,*
3' 5'Atomic structure of the large ribosomal subunit 880 AC amino,2-carbonyl (1 bond)
5' 3'
C-A,carbonyl-amino
C-A
A-C,reverse Hoogteen
3' 5'SRP19 881 AC amino,2-carbonyl (1 bond)
5' 3'
C-A,Reverse Hoogsteen
A-C
G-U, Wobble
3' 5'Ribonucleoprotein of the SRP 882 AC amino,2-carbonyl (1 bond)
5' 3'
C-A,reverse Hoogsteen
A-C
G-U,Wobble
3' 5'4.5S RNA, domain IV, loopA 883 AC amino,2-carbonyl (1 bond)
5' 3'
C-G,Watson-Crick
A-C
U A,*
3' 5'tRNA (Ile) 884 AC amino,2-carbonyl (1 bond)
5' 3'
G A,*
A-C
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 885 AC amino,2-carbonyl (1 bond)
5' 3'
G U,*
A-C
U-A,Watson-Crick
3' 5'tRNA (tyr) 886 AC amino,2-carbonyl (1 bond)
5' 3'
G-C,Watson-Crick
C-A
C-A,carbonyl-amino
3' 5'SRP19 887 AC amino,2-carbonyl (1 bond)
5' 3'
G-U,wobble
A-C
C-A,reverse Hoogsteen
3' 5'dodecamer 888 AC amino,2-carbonyl (1 bond)
5' 3'
U C,*
A-C
A-U,amino-2-carbonyl
3' 5'Atomic structure of the large ribosomal subunit (5S) 889 AC amino,2-carbonyl (1 bond)
5' 3'
U U,*
A-C
G U,*
3' 5'Atomic structure of the large ribosomal subunit 890 AC amino,2-carbonyl (1 bond)
5' 3'
U-G,Wobble
A-C
A U,*
3' 5'T4 RNA hairpin of bacteriophage 891 AC amino,2-carbonyl (1 bond)
5' 3'
Y U,*
A-C
Y A,*
3' 5'Yeast tRNA (Phe) 892 AC amino-N3 (1 bond)
5' 3'
C U,*
A-C
G-C,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 893 AC amino-N3 (1 bond)
5' 3'
C-G,Watson-Crick
A-C
U A,*
3' 5'Structure of the 30S ribosomal subunit 894 AC amino-N3 (1 bond)
5' 3'
G G,*
A-C
C G,*
3' 5'Dienococcus Radiodurans 23S RNA 895 AC amino-N3 (1 bond)
5' 3'
G-C,Watson-Crick
A-C
U-A,4-carbonyl-amino
3' 5'Atomic structure of the large ribosomal subunit 896 AC amino-N3 (1 bond)
5' 3'
G-C,Watson-Crick
C-A
C-A,carbonyl-amino
3' 5'Structure of the 30S ribosomal subunit 897 AC amino-N3 (1 bond)
5' 3'
U G,*
A-C
C A,*
3' 5'Specificity domain of RNAse P 898 AC N1-amino (1 bond)
5' 3'
C A,*
A-C
G U,*
3' 5'Atomic structure of the large ribosomal subunit 899 AC N1-amino (1 bond)
5' 3'
C U,*
A-C
A G,*
3' 5'Influenza virus panhandle RNA 900 AC N1-amino (1 bond)
5' 3'
C-A,reverse Hoogsteen
A-C
G-C,Watson-Crick
3' 5'Structure of the 30S ribosomal subunit 901 AC N1-amino (1 bond)
5' 3'
C-G,Watson-Crick
A-C
A C,*
3' 5'Atomic structure of the large ribosomal subunit 902 AC N1-amino (1 bond)
5' 3'
C-G,Watson-Crick
A-C
G-A,Sheared
3' 5'Loop B of hairpin ribozyme 903 AC N1-amino (1 bond)
5' 3'
G A,*
C-A
G-C,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 904 AC N1-amino (1 bond)
5' 3'
G U,*
A-C
U-G,amino-carbonyl
3' 5'Atomic structure of the large ribosomal subunit 905 AC N1-amino (1 bond)
5' 3'
G-A,sheared
A-C
U U,*
3' 5'Structure of the 30S ribosomal subunit 906 AC N1-amino (1 bond)
5' 3'
G-C,Watson-Crick
A-C
A U,*
3' 5'Atomic structure of the large ribosomal subunit (5S) 907 AC N1-amino (1 bond)
5' 3'
G-C,Watson-Crick
A-C
C-A,Wobble
3' 5'Helix 6 of human SRP 908 AC N1-amino (1 bond)
5' 3'
G-C,Watson-Crick
A-C
G-A,sheared
3' 5'Atomic structure of the large ribosomal subunit 909 AC N1-amino (1 bond)
5' 3'
G-C,Watson-Crick
A-C
U-A,2-carbonyl-amino
3' 5'Structure of the 30S ribosomal subunit 910 AC N1-amino (1 bond)
5' 3'
U C,*
A-C
G-U,Wobble
3' 5'tRNA (Cys) 911 AC N3-amino (1 bond)
5' 3'
A A,*
A-C
C A,*
3' 5'Atomic structure of the large ribosomal subunit 912 AC N3-amino (1 bond)
5' 3'
A A,*
A-C
C C,*
3' 5'Atomic structure of the large ribosomal subunit 913 AC N3-amino (1 bond)
5' 3'
A-A,N7-amino,symmetric
C-A
C-G,Watson-Crick
3' 5'Atomic structure of the large ribosomal subunit 914 AC N3-amino (1 bond)
5' 3'
C-G,Watson-Crick
A-C
C A,*
3' 5'Atomic structure of the large ribosomal subunit 915 AC N3-amino (1 bond)
5' 3'
G U,*
A-C
U-A,4-carbonyl-N7
3' 5'Atomic structure of the large ribosomal subunit 916 AC N3-amino (1 bond)
5' 3'
U U,*
A-C
C C,*
3' 5'Atomic structure of the large ribosomal subunit 917 AC N3-amino (1 bond)
5' 3'
U-G,Wobble
A-C
C C,*
3' 5'Atomic structure of the large ribosomal subunit 918 AC N3-amino (1 bond)
5' 3'
U-G,Wobble
A-C
C G,*
3' 5'Atomic structure of the large ribosomal subunit 919 AC N7-amino (1 bond)
5' 3'
C G,*
A-C
A-A,amino-N7(1 bond)
3' 5'Atomic structure of the large ribosomal subunit 920 AC N7-amino (1 bond)
5' 3'
G A,*
A-C
A C,*
3' 5'Atomic structure of the large ribosomal subunit 921 AC N7-amino (1 bond)
5' 3'
U A,*
A-C
C G,*
3' 5'Atomic structure of the large ribosomal subunit 922 AU amino-2-carbonyl (1 bond)
5' 3'
A-U
G C,*
3' 5'Dienococcus Radiodurans 23S RNA 923 AU amino-2-carbonyl (1 bond)
5' 3'
A-U
A G,*
3' 5'Dienococcus Radiodurans 23S RNA 924 AU amino-2-carbonyl (1 bond)
5' 3'
A A,*
A-U
G-U,reverse wobble
3' 5'Atomic structure of the large ribosomal subunit 925 AU amino-2-carbonyl (1 bond)
5' 3'
A C,*
A-U
G C,*
3' 5'Atomic structure of the large ribosomal subunit 926 AU amino-2-carbonyl (1 bond)
5' 3'
A G,*
A-U
A G,*
3' 5'Atomic structure of the large ribosomal subunit 927